Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim80Q3V061 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Trim80Q3V061 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim80Q3V061 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim80Q3V061 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.31■□□□□ 0.52
Trim80Q3V061 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim80Q3V061 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim80Q3V061 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim80Q3V061 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trim80Q3V061 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Trim80Q3V061 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.31■□□□□ 0.52
Trim80Q3V061 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trim80Q3V061 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim80Q3V061 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim80Q3V061 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim80Q3V061 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trim80Q3V061 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trim80Q3V061 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim80Q3V061 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.31■□□□□ 0.52
Trim80Q3V061 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim80Q3V061 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim80Q3V061 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim80Q3V061 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim80Q3V061 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
Trim80Q3V061 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Trim80Q3V061 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC18.3■□□□□ 0.52
Trim80Q3V061 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trim80Q3V061 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Trim80Q3V061 Reep4-203ENSMUST00000226563 1444 ntBASIC18.3■□□□□ 0.52
Trim80Q3V061 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim80Q3V061 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim80Q3V061 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim80Q3V061 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim80Q3V061 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trim80Q3V061 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.29■□□□□ 0.52
Trim80Q3V061 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim80Q3V061 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim80Q3V061 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.29■□□□□ 0.52
Trim80Q3V061 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim80Q3V061 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim80Q3V061 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim80Q3V061 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim80Q3V061 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trim80Q3V061 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
Trim80Q3V061 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim80Q3V061 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim80Q3V061 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim80Q3V061 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim80Q3V061 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim80Q3V061 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim80Q3V061 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.28■□□□□ 0.52
Trim80Q3V061 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim80Q3V061 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Trim80Q3V061 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trim80Q3V061 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trim80Q3V061 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim80Q3V061 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Trim80Q3V061 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim80Q3V061 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim80Q3V061 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim80Q3V061 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim80Q3V061 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Trim80Q3V061 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.27■□□□□ 0.52
Trim80Q3V061 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim80Q3V061 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim80Q3V061 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trim80Q3V061 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim80Q3V061 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim80Q3V061 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.27■□□□□ 0.52
Trim80Q3V061 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.27■□□□□ 0.52
Trim80Q3V061 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.27■□□□□ 0.52
Trim80Q3V061 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.27■□□□□ 0.52
Trim80Q3V061 Gm7514-201ENSMUST00000209475 934 ntBASIC18.27■□□□□ 0.52
Trim80Q3V061 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim80Q3V061 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim80Q3V061 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim80Q3V061 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Trim80Q3V061 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC18.27■□□□□ 0.51
Trim80Q3V061 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Trim80Q3V061 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim80Q3V061 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Trim80Q3V061 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim80Q3V061 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Trim80Q3V061 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Trim80Q3V061 Gm12441-201ENSMUST00000121806 588 ntBASIC18.26■□□□□ 0.51
Trim80Q3V061 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim80Q3V061 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim80Q3V061 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim80Q3V061 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Trim80Q3V061 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim80Q3V061 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Trim80Q3V061 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim80Q3V061 Gm5421-201ENSMUST00000181698 2354 ntBASIC18.26■□□□□ 0.51
Trim80Q3V061 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim80Q3V061 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Trim80Q3V061 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim80Q3V061 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim80Q3V061 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Trim80Q3V061 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim80Q3V061 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms