Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC20.6■□□□□ 0.89
Cdkl5Q3UTQ8 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdkl5Q3UTQ8 Gm21596-201ENSMUST00000178049 1316 ntBASIC20.6■□□□□ 0.89
Cdkl5Q3UTQ8 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC20.6■□□□□ 0.89
Cdkl5Q3UTQ8 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdkl5Q3UTQ8 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC20.6■□□□□ 0.89
Cdkl5Q3UTQ8 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cdkl5Q3UTQ8 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cdkl5Q3UTQ8 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC20.6■□□□□ 0.89
Cdkl5Q3UTQ8 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC20.6■□□□□ 0.89
Cdkl5Q3UTQ8 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Cdkl5Q3UTQ8 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cdkl5Q3UTQ8 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC20.6■□□□□ 0.89
Cdkl5Q3UTQ8 Gm44832-201ENSMUST00000208849 2303 ntBASIC20.6■□□□□ 0.89
Cdkl5Q3UTQ8 Idnk-204ENSMUST00000226010 1898 ntBASIC20.6■□□□□ 0.89
Cdkl5Q3UTQ8 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdkl5Q3UTQ8 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdkl5Q3UTQ8 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdkl5Q3UTQ8 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdkl5Q3UTQ8 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdkl5Q3UTQ8 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC20.59■□□□□ 0.89
Cdkl5Q3UTQ8 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdkl5Q3UTQ8 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdkl5Q3UTQ8 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC20.59■□□□□ 0.89
Cdkl5Q3UTQ8 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Cdkl5Q3UTQ8 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC20.59■□□□□ 0.89
Cdkl5Q3UTQ8 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC20.59■□□□□ 0.89
Cdkl5Q3UTQ8 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdkl5Q3UTQ8 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cdkl5Q3UTQ8 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cdkl5Q3UTQ8 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cdkl5Q3UTQ8 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cdkl5Q3UTQ8 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cdkl5Q3UTQ8 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cdkl5Q3UTQ8 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cdkl5Q3UTQ8 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Cdkl5Q3UTQ8 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Cdkl5Q3UTQ8 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Cdkl5Q3UTQ8 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cdkl5Q3UTQ8 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cdkl5Q3UTQ8 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Cdkl5Q3UTQ8 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cdkl5Q3UTQ8 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cdkl5Q3UTQ8 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC20.58■□□□□ 0.88
Cdkl5Q3UTQ8 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cdkl5Q3UTQ8 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdkl5Q3UTQ8 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdkl5Q3UTQ8 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdkl5Q3UTQ8 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdkl5Q3UTQ8 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC20.57■□□□□ 0.88
Cdkl5Q3UTQ8 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cdkl5Q3UTQ8 Mir2861-201ENSMUST00000175539 82 ntBASIC20.57■□□□□ 0.88
Cdkl5Q3UTQ8 Gm10138-203ENSMUST00000206952 366 ntBASIC20.57■□□□□ 0.88
Cdkl5Q3UTQ8 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdkl5Q3UTQ8 Mtag2-201ENSMUST00000058665 714 ntBASIC20.57■□□□□ 0.88
Cdkl5Q3UTQ8 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdkl5Q3UTQ8 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdkl5Q3UTQ8 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdkl5Q3UTQ8 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdkl5Q3UTQ8 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdkl5Q3UTQ8 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdkl5Q3UTQ8 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdkl5Q3UTQ8 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdkl5Q3UTQ8 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cdkl5Q3UTQ8 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdkl5Q3UTQ8 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdkl5Q3UTQ8 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdkl5Q3UTQ8 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdkl5Q3UTQ8 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdkl5Q3UTQ8 Gm29791-202ENSMUST00000207888 369 ntBASIC20.56■□□□□ 0.88
Cdkl5Q3UTQ8 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdkl5Q3UTQ8 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdkl5Q3UTQ8 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdkl5Q3UTQ8 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cdkl5Q3UTQ8 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cdkl5Q3UTQ8 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdkl5Q3UTQ8 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdkl5Q3UTQ8 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC20.55■□□□□ 0.88
Cdkl5Q3UTQ8 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cdkl5Q3UTQ8 Gm11249-201ENSMUST00000117071 859 ntBASIC20.55■□□□□ 0.88
Cdkl5Q3UTQ8 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC20.55■□□□□ 0.88
Cdkl5Q3UTQ8 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC20.55■□□□□ 0.88
Cdkl5Q3UTQ8 Mir6349-201ENSMUST00000184059 97 ntBASIC20.55■□□□□ 0.88
Cdkl5Q3UTQ8 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC20.55■□□□□ 0.88
Cdkl5Q3UTQ8 Gm20049-201ENSMUST00000219950 730 ntBASIC20.55■□□□□ 0.88
Cdkl5Q3UTQ8 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdkl5Q3UTQ8 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Cdkl5Q3UTQ8 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cdkl5Q3UTQ8 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdkl5Q3UTQ8 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdkl5Q3UTQ8 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Cdkl5Q3UTQ8 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdkl5Q3UTQ8 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdkl5Q3UTQ8 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Cdkl5Q3UTQ8 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdkl5Q3UTQ8 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdkl5Q3UTQ8 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdkl5Q3UTQ8 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdkl5Q3UTQ8 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdkl5Q3UTQ8 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms