Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC15.33■□□□□ 0.04
Shisa3Q3UPR0 Gm13234-201ENSMUST00000120010 747 ntBASIC15.33■□□□□ 0.04
Shisa3Q3UPR0 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Shisa3Q3UPR0 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Shisa3Q3UPR0 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC15.33■□□□□ 0.04
Shisa3Q3UPR0 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC15.33■□□□□ 0.04
Shisa3Q3UPR0 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC15.33■□□□□ 0.04
Shisa3Q3UPR0 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC15.33■□□□□ 0.04
Shisa3Q3UPR0 Gm10033-202ENSMUST00000211874 928 ntBASIC15.33■□□□□ 0.04
Shisa3Q3UPR0 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Shisa3Q3UPR0 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Shisa3Q3UPR0 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Shisa3Q3UPR0 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Shisa3Q3UPR0 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Shisa3Q3UPR0 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Shisa3Q3UPR0 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Shisa3Q3UPR0 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Shisa3Q3UPR0 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Shisa3Q3UPR0 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Shisa3Q3UPR0 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Shisa3Q3UPR0 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Shisa3Q3UPR0 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC15.32■□□□□ 0.04
Shisa3Q3UPR0 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Shisa3Q3UPR0 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Shisa3Q3UPR0 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Shisa3Q3UPR0 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Shisa3Q3UPR0 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Shisa3Q3UPR0 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Shisa3Q3UPR0 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Shisa3Q3UPR0 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Shisa3Q3UPR0 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC15.32■□□□□ 0.04
Shisa3Q3UPR0 Gm42569-201ENSMUST00000200539 472 ntBASIC15.32■□□□□ 0.04
Shisa3Q3UPR0 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Shisa3Q3UPR0 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Shisa3Q3UPR0 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Shisa3Q3UPR0 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Shisa3Q3UPR0 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Shisa3Q3UPR0 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Shisa3Q3UPR0 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Shisa3Q3UPR0 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Shisa3Q3UPR0 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Shisa3Q3UPR0 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Shisa3Q3UPR0 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Shisa3Q3UPR0 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Shisa3Q3UPR0 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Shisa3Q3UPR0 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Shisa3Q3UPR0 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Shisa3Q3UPR0 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Shisa3Q3UPR0 Idnk-204ENSMUST00000226010 1898 ntBASIC15.31■□□□□ 0.04
Shisa3Q3UPR0 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Shisa3Q3UPR0 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Shisa3Q3UPR0 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC15.31■□□□□ 0.04
Shisa3Q3UPR0 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Shisa3Q3UPR0 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Shisa3Q3UPR0 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Shisa3Q3UPR0 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Shisa3Q3UPR0 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Shisa3Q3UPR0 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Shisa3Q3UPR0 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Shisa3Q3UPR0 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Shisa3Q3UPR0 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Shisa3Q3UPR0 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Shisa3Q3UPR0 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC15.3■□□□□ 0.04
Shisa3Q3UPR0 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shisa3Q3UPR0 Gm38205-201ENSMUST00000192243 258 ntBASIC15.3■□□□□ 0.04
Shisa3Q3UPR0 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shisa3Q3UPR0 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shisa3Q3UPR0 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shisa3Q3UPR0 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shisa3Q3UPR0 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shisa3Q3UPR0 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC15.3■□□□□ 0.04
Shisa3Q3UPR0 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shisa3Q3UPR0 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
Shisa3Q3UPR0 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Shisa3Q3UPR0 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shisa3Q3UPR0 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shisa3Q3UPR0 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC15.29■□□□□ 0.04
Shisa3Q3UPR0 Gm38345-201ENSMUST00000192635 1748 ntBASIC15.29■□□□□ 0.04
Shisa3Q3UPR0 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Shisa3Q3UPR0 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Shisa3Q3UPR0 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Shisa3Q3UPR0 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC15.29■□□□□ 0.04
Shisa3Q3UPR0 AV356131-201ENSMUST00000206201 750 ntBASIC15.29■□□□□ 0.04
Shisa3Q3UPR0 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Shisa3Q3UPR0 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC15.29■□□□□ 0.04
Shisa3Q3UPR0 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Shisa3Q3UPR0 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Shisa3Q3UPR0 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Shisa3Q3UPR0 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Shisa3Q3UPR0 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Shisa3Q3UPR0 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Shisa3Q3UPR0 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Shisa3Q3UPR0 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Shisa3Q3UPR0 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Shisa3Q3UPR0 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
Shisa3Q3UPR0 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Shisa3Q3UPR0 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC15.28■□□□□ 0.04
Shisa3Q3UPR0 Gm10849-201ENSMUST00000100397 618 ntBASIC15.28■□□□□ 0.04
Shisa3Q3UPR0 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Shisa3Q3UPR0 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms