Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Nlrc4Q3UP24 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.69■□□□□ 0.58
Nlrc4Q3UP24 Gm13401-201ENSMUST00000117074 291 ntBASIC18.69■□□□□ 0.58
Nlrc4Q3UP24 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.69■□□□□ 0.58
Nlrc4Q3UP24 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Nlrc4Q3UP24 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Nlrc4Q3UP24 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Nlrc4Q3UP24 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.69■□□□□ 0.58
Nlrc4Q3UP24 Gm29791-202ENSMUST00000207888 369 ntBASIC18.69■□□□□ 0.58
Nlrc4Q3UP24 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC18.69■□□□□ 0.58
Nlrc4Q3UP24 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nlrc4Q3UP24 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nlrc4Q3UP24 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nlrc4Q3UP24 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Nlrc4Q3UP24 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nlrc4Q3UP24 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nlrc4Q3UP24 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Nlrc4Q3UP24 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Nlrc4Q3UP24 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nlrc4Q3UP24 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nlrc4Q3UP24 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nlrc4Q3UP24 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.68■□□□□ 0.58
Nlrc4Q3UP24 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nlrc4Q3UP24 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nlrc4Q3UP24 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC18.68■□□□□ 0.58
Nlrc4Q3UP24 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
Nlrc4Q3UP24 Gm11643-201ENSMUST00000119578 864 ntBASIC18.68■□□□□ 0.58
Nlrc4Q3UP24 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nlrc4Q3UP24 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nlrc4Q3UP24 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nlrc4Q3UP24 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nlrc4Q3UP24 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Nlrc4Q3UP24 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nlrc4Q3UP24 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nlrc4Q3UP24 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Nlrc4Q3UP24 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Nlrc4Q3UP24 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nlrc4Q3UP24 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC18.67■□□□□ 0.58
Nlrc4Q3UP24 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nlrc4Q3UP24 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC18.67■□□□□ 0.58
Nlrc4Q3UP24 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.67■□□□□ 0.58
Nlrc4Q3UP24 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nlrc4Q3UP24 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nlrc4Q3UP24 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Nlrc4Q3UP24 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nlrc4Q3UP24 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.67■□□□□ 0.58
Nlrc4Q3UP24 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nlrc4Q3UP24 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nlrc4Q3UP24 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nlrc4Q3UP24 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Nlrc4Q3UP24 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nlrc4Q3UP24 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nlrc4Q3UP24 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nlrc4Q3UP24 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.66■□□□□ 0.58
Nlrc4Q3UP24 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Nlrc4Q3UP24 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nlrc4Q3UP24 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nlrc4Q3UP24 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Nlrc4Q3UP24 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nlrc4Q3UP24 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nlrc4Q3UP24 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nlrc4Q3UP24 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nlrc4Q3UP24 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nlrc4Q3UP24 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nlrc4Q3UP24 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nlrc4Q3UP24 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nlrc4Q3UP24 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nlrc4Q3UP24 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nlrc4Q3UP24 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.65■□□□□ 0.58
Nlrc4Q3UP24 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nlrc4Q3UP24 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.65■□□□□ 0.58
Nlrc4Q3UP24 Gm12382-201ENSMUST00000122005 922 ntBASIC18.65■□□□□ 0.58
Nlrc4Q3UP24 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC18.65■□□□□ 0.58
Nlrc4Q3UP24 Gm6576-201ENSMUST00000169678 883 ntBASIC18.65■□□□□ 0.58
Nlrc4Q3UP24 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nlrc4Q3UP24 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.65■□□□□ 0.58
Nlrc4Q3UP24 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Nlrc4Q3UP24 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nlrc4Q3UP24 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nlrc4Q3UP24 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nlrc4Q3UP24 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nlrc4Q3UP24 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nlrc4Q3UP24 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nlrc4Q3UP24 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nlrc4Q3UP24 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Nlrc4Q3UP24 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Nlrc4Q3UP24 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Nlrc4Q3UP24 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Nlrc4Q3UP24 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nlrc4Q3UP24 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nlrc4Q3UP24 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Nlrc4Q3UP24 Gm10418-201ENSMUST00000100943 576 ntBASIC18.64■□□□□ 0.57
Nlrc4Q3UP24 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nlrc4Q3UP24 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nlrc4Q3UP24 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Nlrc4Q3UP24 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nlrc4Q3UP24 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nlrc4Q3UP24 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nlrc4Q3UP24 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.63■□□□□ 0.57
Nlrc4Q3UP24 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms