Protein–RNA interactions for Protein: Q3UN04

Usp30, Ubiquitin carboxyl-terminal hydrolase 30, mousemouse

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp30Q3UN04 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Usp30Q3UN04 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp30Q3UN04 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
Usp30Q3UN04 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp30Q3UN04 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Usp30Q3UN04 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp30Q3UN04 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Usp30Q3UN04 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.84■□□□□ 0.45
Usp30Q3UN04 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.84■□□□□ 0.45
Usp30Q3UN04 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.84■□□□□ 0.45
Usp30Q3UN04 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Usp30Q3UN04 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.84■□□□□ 0.45
Usp30Q3UN04 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.84■□□□□ 0.45
Usp30Q3UN04 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.84■□□□□ 0.45
Usp30Q3UN04 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp30Q3UN04 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp30Q3UN04 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp30Q3UN04 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Usp30Q3UN04 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Usp30Q3UN04 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Usp30Q3UN04 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Usp30Q3UN04 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Usp30Q3UN04 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Usp30Q3UN04 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Usp30Q3UN04 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Usp30Q3UN04 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Usp30Q3UN04 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Usp30Q3UN04 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Usp30Q3UN04 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Usp30Q3UN04 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Usp30Q3UN04 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Usp30Q3UN04 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Usp30Q3UN04 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Usp30Q3UN04 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp30Q3UN04 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp30Q3UN04 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Usp30Q3UN04 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.82■□□□□ 0.44
Usp30Q3UN04 Gm18959-201ENSMUST00000208954 655 ntBASIC17.82■□□□□ 0.44
Usp30Q3UN04 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp30Q3UN04 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.82■□□□□ 0.44
Usp30Q3UN04 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Usp30Q3UN04 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp30Q3UN04 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Usp30Q3UN04 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp30Q3UN04 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Usp30Q3UN04 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Usp30Q3UN04 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp30Q3UN04 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.81■□□□□ 0.44
Usp30Q3UN04 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Usp30Q3UN04 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Usp30Q3UN04 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.81■□□□□ 0.44
Usp30Q3UN04 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Usp30Q3UN04 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.81■□□□□ 0.44
Usp30Q3UN04 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp30Q3UN04 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp30Q3UN04 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp30Q3UN04 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp30Q3UN04 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp30Q3UN04 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp30Q3UN04 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp30Q3UN04 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Usp30Q3UN04 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp30Q3UN04 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp30Q3UN04 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp30Q3UN04 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp30Q3UN04 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Usp30Q3UN04 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp30Q3UN04 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp30Q3UN04 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp30Q3UN04 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.8■□□□□ 0.44
Usp30Q3UN04 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Usp30Q3UN04 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp30Q3UN04 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp30Q3UN04 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp30Q3UN04 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp30Q3UN04 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Usp30Q3UN04 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp30Q3UN04 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Usp30Q3UN04 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp30Q3UN04 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Usp30Q3UN04 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp30Q3UN04 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.79■□□□□ 0.44
Usp30Q3UN04 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Usp30Q3UN04 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.79■□□□□ 0.44
Usp30Q3UN04 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.79■□□□□ 0.44
Usp30Q3UN04 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Usp30Q3UN04 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.79■□□□□ 0.44
Usp30Q3UN04 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp30Q3UN04 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp30Q3UN04 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp30Q3UN04 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp30Q3UN04 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp30Q3UN04 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp30Q3UN04 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp30Q3UN04 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp30Q3UN04 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp30Q3UN04 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Usp30Q3UN04 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp30Q3UN04 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp30Q3UN04 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms