Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Gm3375-201ENSMUST00000203929 796 ntBASIC18.03■□□□□ 0.48
Naf1Q3UMQ8 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.03■□□□□ 0.48
Naf1Q3UMQ8 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Naf1Q3UMQ8 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Naf1Q3UMQ8 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Naf1Q3UMQ8 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.03■□□□□ 0.48
Naf1Q3UMQ8 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Naf1Q3UMQ8 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Naf1Q3UMQ8 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Naf1Q3UMQ8 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.03■□□□□ 0.48
Naf1Q3UMQ8 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Naf1Q3UMQ8 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Naf1Q3UMQ8 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.02■□□□□ 0.48
Naf1Q3UMQ8 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Naf1Q3UMQ8 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Naf1Q3UMQ8 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Naf1Q3UMQ8 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Naf1Q3UMQ8 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Naf1Q3UMQ8 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Naf1Q3UMQ8 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
Naf1Q3UMQ8 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Naf1Q3UMQ8 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Naf1Q3UMQ8 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Naf1Q3UMQ8 Gm43799-201ENSMUST00000201845 579 ntBASIC18.02■□□□□ 0.48
Naf1Q3UMQ8 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Naf1Q3UMQ8 AC153881.2-201ENSMUST00000214877 204 ntBASIC18.02■□□□□ 0.48
Naf1Q3UMQ8 Odf3b-204ENSMUST00000227834 930 ntBASIC18.02■□□□□ 0.48
Naf1Q3UMQ8 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Naf1Q3UMQ8 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Naf1Q3UMQ8 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Naf1Q3UMQ8 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Naf1Q3UMQ8 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Naf1Q3UMQ8 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Naf1Q3UMQ8 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.02■□□□□ 0.47
Naf1Q3UMQ8 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Naf1Q3UMQ8 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Naf1Q3UMQ8 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Naf1Q3UMQ8 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Naf1Q3UMQ8 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Naf1Q3UMQ8 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Naf1Q3UMQ8 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Naf1Q3UMQ8 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Naf1Q3UMQ8 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Naf1Q3UMQ8 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Naf1Q3UMQ8 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
Naf1Q3UMQ8 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Naf1Q3UMQ8 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Naf1Q3UMQ8 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Naf1Q3UMQ8 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Naf1Q3UMQ8 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Naf1Q3UMQ8 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC18■□□□□ 0.47
Naf1Q3UMQ8 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18■□□□□ 0.47
Naf1Q3UMQ8 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18■□□□□ 0.47
Naf1Q3UMQ8 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18■□□□□ 0.47
Naf1Q3UMQ8 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18■□□□□ 0.47
Naf1Q3UMQ8 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Naf1Q3UMQ8 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Naf1Q3UMQ8 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18■□□□□ 0.47
Naf1Q3UMQ8 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Naf1Q3UMQ8 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Naf1Q3UMQ8 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Naf1Q3UMQ8 Gm11643-201ENSMUST00000119578 864 ntBASIC18■□□□□ 0.47
Naf1Q3UMQ8 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC18■□□□□ 0.47
Naf1Q3UMQ8 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC18■□□□□ 0.47
Naf1Q3UMQ8 Timm23-208ENSMUST00000226683 750 ntBASIC18■□□□□ 0.47
Naf1Q3UMQ8 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Naf1Q3UMQ8 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18■□□□□ 0.47
Naf1Q3UMQ8 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Naf1Q3UMQ8 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Naf1Q3UMQ8 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Naf1Q3UMQ8 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Naf1Q3UMQ8 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Naf1Q3UMQ8 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Naf1Q3UMQ8 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Naf1Q3UMQ8 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Naf1Q3UMQ8 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Naf1Q3UMQ8 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.99■□□□□ 0.47
Naf1Q3UMQ8 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.99■□□□□ 0.47
Naf1Q3UMQ8 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Naf1Q3UMQ8 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Naf1Q3UMQ8 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Naf1Q3UMQ8 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.98■□□□□ 0.47
Naf1Q3UMQ8 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Naf1Q3UMQ8 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Naf1Q3UMQ8 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Naf1Q3UMQ8 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.98■□□□□ 0.47
Naf1Q3UMQ8 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Naf1Q3UMQ8 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.98■□□□□ 0.47
Naf1Q3UMQ8 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.98■□□□□ 0.47
Naf1Q3UMQ8 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.98■□□□□ 0.47
Naf1Q3UMQ8 Gm30025-201ENSMUST00000218555 728 ntBASIC17.98■□□□□ 0.47
Naf1Q3UMQ8 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Naf1Q3UMQ8 Gm9987-201ENSMUST00000069768 567 ntBASIC17.98■□□□□ 0.47
Naf1Q3UMQ8 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Naf1Q3UMQ8 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Naf1Q3UMQ8 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Naf1Q3UMQ8 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Naf1Q3UMQ8 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Naf1Q3UMQ8 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Naf1Q3UMQ8 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms