Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Spg11Q3UHA3 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Spg11Q3UHA3 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Spg11Q3UHA3 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Spg11Q3UHA3 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Spg11Q3UHA3 Actl10-202ENSMUST00000226583 1501 ntBASIC16.45■□□□□ 0.22
Spg11Q3UHA3 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Spg11Q3UHA3 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Spg11Q3UHA3 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Spg11Q3UHA3 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Spg11Q3UHA3 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
Spg11Q3UHA3 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC16.45■□□□□ 0.22
Spg11Q3UHA3 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Spg11Q3UHA3 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Spg11Q3UHA3 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Spg11Q3UHA3 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.44■□□□□ 0.22
Spg11Q3UHA3 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Spg11Q3UHA3 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Spg11Q3UHA3 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC16.44■□□□□ 0.22
Spg11Q3UHA3 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Spg11Q3UHA3 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Spg11Q3UHA3 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Spg11Q3UHA3 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.44■□□□□ 0.22
Spg11Q3UHA3 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Spg11Q3UHA3 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Spg11Q3UHA3 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC16.44■□□□□ 0.22
Spg11Q3UHA3 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Spg11Q3UHA3 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Spg11Q3UHA3 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Spg11Q3UHA3 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC16.44■□□□□ 0.22
Spg11Q3UHA3 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC16.44■□□□□ 0.22
Spg11Q3UHA3 Gm45640-201ENSMUST00000210665 1896 ntBASIC16.44■□□□□ 0.22
Spg11Q3UHA3 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Spg11Q3UHA3 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.43■□□□□ 0.22
Spg11Q3UHA3 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Spg11Q3UHA3 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Spg11Q3UHA3 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC16.43■□□□□ 0.22
Spg11Q3UHA3 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Spg11Q3UHA3 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Spg11Q3UHA3 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Spg11Q3UHA3 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Spg11Q3UHA3 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Spg11Q3UHA3 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Spg11Q3UHA3 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Spg11Q3UHA3 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Spg11Q3UHA3 Gm10060-201ENSMUST00000212002 111 ntBASIC16.43■□□□□ 0.22
Spg11Q3UHA3 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
Spg11Q3UHA3 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Spg11Q3UHA3 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Spg11Q3UHA3 Psmb5-202ENSMUST00000227257 622 ntBASIC16.42■□□□□ 0.22
Spg11Q3UHA3 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Spg11Q3UHA3 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Spg11Q3UHA3 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Spg11Q3UHA3 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Spg11Q3UHA3 Gm24513-201ENSMUST00000174964 138 ntBASIC16.41■□□□□ 0.22
Spg11Q3UHA3 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Spg11Q3UHA3 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Spg11Q3UHA3 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC16.41■□□□□ 0.22
Spg11Q3UHA3 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Spg11Q3UHA3 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC16.41■□□□□ 0.22
Spg11Q3UHA3 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Spg11Q3UHA3 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Spg11Q3UHA3 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Spg11Q3UHA3 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Spg11Q3UHA3 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Spg11Q3UHA3 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.41■□□□□ 0.22
Spg11Q3UHA3 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Spg11Q3UHA3 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC16.41■□□□□ 0.22
Spg11Q3UHA3 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Spg11Q3UHA3 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Spg11Q3UHA3 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Spg11Q3UHA3 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Spg11Q3UHA3 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC16.4■□□□□ 0.22
Spg11Q3UHA3 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Spg11Q3UHA3 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.4■□□□□ 0.22
Spg11Q3UHA3 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Spg11Q3UHA3 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Spg11Q3UHA3 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Spg11Q3UHA3 Gm15920-201ENSMUST00000118998 402 ntBASIC16.4■□□□□ 0.22
Spg11Q3UHA3 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC16.4■□□□□ 0.22
Spg11Q3UHA3 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.4■□□□□ 0.22
Spg11Q3UHA3 Gm6376-201ENSMUST00000209407 580 ntBASIC16.4■□□□□ 0.22
Spg11Q3UHA3 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Spg11Q3UHA3 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Spg11Q3UHA3 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Spg11Q3UHA3 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
Spg11Q3UHA3 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Spg11Q3UHA3 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Spg11Q3UHA3 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Spg11Q3UHA3 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Spg11Q3UHA3 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Spg11Q3UHA3 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.39■□□□□ 0.21
Spg11Q3UHA3 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC16.39■□□□□ 0.21
Spg11Q3UHA3 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.39■□□□□ 0.21
Spg11Q3UHA3 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Spg11Q3UHA3 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Spg11Q3UHA3 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Spg11Q3UHA3 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC16.39■□□□□ 0.21
Spg11Q3UHA3 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Spg11Q3UHA3 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms