Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Col5a2Q3U962 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Col5a2Q3U962 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.98
Col5a2Q3U962 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
Col5a2Q3U962 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Col5a2Q3U962 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC21.14■□□□□ 0.97
Col5a2Q3U962 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Col5a2Q3U962 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Col5a2Q3U962 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
Col5a2Q3U962 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC21.13■□□□□ 0.97
Col5a2Q3U962 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC21.13■□□□□ 0.97
Col5a2Q3U962 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC21.13■□□□□ 0.97
Col5a2Q3U962 Gm37025-201ENSMUST00000195159 829 ntBASIC21.13■□□□□ 0.97
Col5a2Q3U962 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Col5a2Q3U962 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Col5a2Q3U962 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Col5a2Q3U962 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Col5a2Q3U962 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Col5a2Q3U962 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Col5a2Q3U962 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Col5a2Q3U962 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Col5a2Q3U962 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC21.13■□□□□ 0.97
Col5a2Q3U962 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Col5a2Q3U962 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Col5a2Q3U962 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Col5a2Q3U962 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Col5a2Q3U962 Gm45906-201ENSMUST00000208911 1430 ntBASIC21.12■□□□□ 0.97
Col5a2Q3U962 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Col5a2Q3U962 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Col5a2Q3U962 Gm37820-201ENSMUST00000194021 2147 ntBASIC21.12■□□□□ 0.97
Col5a2Q3U962 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC21.12■□□□□ 0.97
Col5a2Q3U962 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Col5a2Q3U962 Gm37722-201ENSMUST00000193757 208 ntBASIC21.12■□□□□ 0.97
Col5a2Q3U962 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Col5a2Q3U962 Gm6443-201ENSMUST00000203599 874 ntBASIC21.12■□□□□ 0.97
Col5a2Q3U962 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
Col5a2Q3U962 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Col5a2Q3U962 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Col5a2Q3U962 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Col5a2Q3U962 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Col5a2Q3U962 Gm9885-202ENSMUST00000186234 2209 ntBASIC21.12■□□□□ 0.97
Col5a2Q3U962 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Col5a2Q3U962 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Col5a2Q3U962 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.12■□□□□ 0.97
Col5a2Q3U962 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Col5a2Q3U962 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC21.11■□□□□ 0.97
Col5a2Q3U962 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC21.11■□□□□ 0.97
Col5a2Q3U962 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Col5a2Q3U962 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Col5a2Q3U962 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Col5a2Q3U962 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Col5a2Q3U962 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Col5a2Q3U962 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Col5a2Q3U962 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Col5a2Q3U962 Actl10-202ENSMUST00000226583 1501 ntBASIC21.1■□□□□ 0.97
Col5a2Q3U962 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Col5a2Q3U962 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Col5a2Q3U962 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Col5a2Q3U962 Gm38308-201ENSMUST00000194934 1809 ntBASIC21.1■□□□□ 0.97
Col5a2Q3U962 Mir770-201ENSMUST00000103252 94 ntBASIC21.1■□□□□ 0.97
Col5a2Q3U962 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC21.1■□□□□ 0.97
Col5a2Q3U962 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Col5a2Q3U962 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC21.1■□□□□ 0.97
Col5a2Q3U962 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Col5a2Q3U962 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Col5a2Q3U962 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Col5a2Q3U962 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC21.1■□□□□ 0.97
Col5a2Q3U962 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Col5a2Q3U962 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Col5a2Q3U962 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Col5a2Q3U962 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC21.09■□□□□ 0.97
Col5a2Q3U962 Olfr129-201ENSMUST00000122318 993 ntBASIC21.09■□□□□ 0.97
Col5a2Q3U962 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Col5a2Q3U962 Gm26039-201ENSMUST00000158152 144 ntBASIC21.09■□□□□ 0.97
Col5a2Q3U962 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC21.09■□□□□ 0.97
Col5a2Q3U962 AC120002.2-201ENSMUST00000220205 773 ntBASIC21.09■□□□□ 0.97
Col5a2Q3U962 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Col5a2Q3U962 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Col5a2Q3U962 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Col5a2Q3U962 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Col5a2Q3U962 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Col5a2Q3U962 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.08■□□□□ 0.97
Col5a2Q3U962 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Col5a2Q3U962 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Col5a2Q3U962 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Col5a2Q3U962 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Col5a2Q3U962 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
Col5a2Q3U962 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC21.07■□□□□ 0.96
Col5a2Q3U962 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC21.07■□□□□ 0.96
Col5a2Q3U962 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Col5a2Q3U962 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Col5a2Q3U962 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Col5a2Q3U962 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Col5a2Q3U962 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Col5a2Q3U962 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Col5a2Q3U962 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Col5a2Q3U962 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Col5a2Q3U962 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC21.07■□□□□ 0.96
Col5a2Q3U962 AC121961.1-201ENSMUST00000218594 1779 ntBASIC21.07■□□□□ 0.96
Col5a2Q3U962 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC21.07■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms