Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Khdc4Q3TCX3 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Khdc4Q3TCX3 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Khdc4Q3TCX3 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Khdc4Q3TCX3 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Khdc4Q3TCX3 Gm15565-201ENSMUST00000118890 427 ntBASIC16.89■□□□□ 0.29
Khdc4Q3TCX3 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC16.89■□□□□ 0.29
Khdc4Q3TCX3 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Khdc4Q3TCX3 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Khdc4Q3TCX3 Gm37055-201ENSMUST00000191866 133 ntBASIC16.89■□□□□ 0.29
Khdc4Q3TCX3 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Khdc4Q3TCX3 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Khdc4Q3TCX3 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Khdc4Q3TCX3 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Khdc4Q3TCX3 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Khdc4Q3TCX3 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Khdc4Q3TCX3 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Khdc4Q3TCX3 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Khdc4Q3TCX3 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Khdc4Q3TCX3 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Khdc4Q3TCX3 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Khdc4Q3TCX3 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Khdc4Q3TCX3 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Khdc4Q3TCX3 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Khdc4Q3TCX3 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Khdc4Q3TCX3 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.88■□□□□ 0.29
Khdc4Q3TCX3 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Khdc4Q3TCX3 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Khdc4Q3TCX3 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC16.88■□□□□ 0.29
Khdc4Q3TCX3 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Khdc4Q3TCX3 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Khdc4Q3TCX3 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Khdc4Q3TCX3 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Khdc4Q3TCX3 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Khdc4Q3TCX3 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Khdc4Q3TCX3 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC16.87■□□□□ 0.29
Khdc4Q3TCX3 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Khdc4Q3TCX3 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Khdc4Q3TCX3 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Khdc4Q3TCX3 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Khdc4Q3TCX3 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Khdc4Q3TCX3 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC16.87■□□□□ 0.29
Khdc4Q3TCX3 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.87■□□□□ 0.29
Khdc4Q3TCX3 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Khdc4Q3TCX3 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Khdc4Q3TCX3 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC16.87■□□□□ 0.29
Khdc4Q3TCX3 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Khdc4Q3TCX3 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.87■□□□□ 0.29
Khdc4Q3TCX3 Wnt10b-205ENSMUST00000226846 1204 ntBASIC16.87■□□□□ 0.29
Khdc4Q3TCX3 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Khdc4Q3TCX3 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.87■□□□□ 0.29
Khdc4Q3TCX3 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC16.87■□□□□ 0.29
Khdc4Q3TCX3 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Khdc4Q3TCX3 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Khdc4Q3TCX3 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Khdc4Q3TCX3 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Khdc4Q3TCX3 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
Khdc4Q3TCX3 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Khdc4Q3TCX3 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Khdc4Q3TCX3 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Khdc4Q3TCX3 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Khdc4Q3TCX3 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Khdc4Q3TCX3 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Khdc4Q3TCX3 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Khdc4Q3TCX3 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Khdc4Q3TCX3 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.86■□□□□ 0.29
Khdc4Q3TCX3 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC16.86■□□□□ 0.29
Khdc4Q3TCX3 Alkbh1-212ENSMUST00000185301 408 ntBASIC16.86■□□□□ 0.29
Khdc4Q3TCX3 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Khdc4Q3TCX3 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Khdc4Q3TCX3 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Khdc4Q3TCX3 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Khdc4Q3TCX3 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Khdc4Q3TCX3 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Khdc4Q3TCX3 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Khdc4Q3TCX3 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Khdc4Q3TCX3 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Khdc4Q3TCX3 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.86■□□□□ 0.29
Khdc4Q3TCX3 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Khdc4Q3TCX3 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Khdc4Q3TCX3 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Khdc4Q3TCX3 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Khdc4Q3TCX3 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
Khdc4Q3TCX3 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
Khdc4Q3TCX3 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Khdc4Q3TCX3 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Khdc4Q3TCX3 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Khdc4Q3TCX3 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Khdc4Q3TCX3 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.85■□□□□ 0.29
Khdc4Q3TCX3 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Khdc4Q3TCX3 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Khdc4Q3TCX3 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Khdc4Q3TCX3 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Khdc4Q3TCX3 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Khdc4Q3TCX3 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Khdc4Q3TCX3 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Khdc4Q3TCX3 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
Khdc4Q3TCX3 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Khdc4Q3TCX3 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Khdc4Q3TCX3 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms