Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ptchd3Q0EEE2 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ptchd3Q0EEE2 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ptchd3Q0EEE2 Tgds-204ENSMUST00000228543 1594 ntBASIC17.16■□□□□ 0.34
Ptchd3Q0EEE2 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ptchd3Q0EEE2 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ptchd3Q0EEE2 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ptchd3Q0EEE2 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ptchd3Q0EEE2 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ptchd3Q0EEE2 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.16■□□□□ 0.34
Ptchd3Q0EEE2 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Ptchd3Q0EEE2 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
Ptchd3Q0EEE2 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Ptchd3Q0EEE2 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ptchd3Q0EEE2 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ptchd3Q0EEE2 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.16■□□□□ 0.34
Ptchd3Q0EEE2 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Ptchd3Q0EEE2 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ptchd3Q0EEE2 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ptchd3Q0EEE2 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ptchd3Q0EEE2 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ptchd3Q0EEE2 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ptchd3Q0EEE2 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ptchd3Q0EEE2 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ptchd3Q0EEE2 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ptchd3Q0EEE2 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.15■□□□□ 0.34
Ptchd3Q0EEE2 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.15■□□□□ 0.34
Ptchd3Q0EEE2 Gm42642-201ENSMUST00000200683 355 ntBASIC17.15■□□□□ 0.34
Ptchd3Q0EEE2 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ptchd3Q0EEE2 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ptchd3Q0EEE2 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ptchd3Q0EEE2 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ptchd3Q0EEE2 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ptchd3Q0EEE2 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ptchd3Q0EEE2 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ptchd3Q0EEE2 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ptchd3Q0EEE2 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.15■□□□□ 0.34
Ptchd3Q0EEE2 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ptchd3Q0EEE2 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ptchd3Q0EEE2 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ptchd3Q0EEE2 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ptchd3Q0EEE2 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ptchd3Q0EEE2 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ptchd3Q0EEE2 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.14■□□□□ 0.33
Ptchd3Q0EEE2 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ptchd3Q0EEE2 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ptchd3Q0EEE2 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.14■□□□□ 0.33
Ptchd3Q0EEE2 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ptchd3Q0EEE2 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Ptchd3Q0EEE2 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ptchd3Q0EEE2 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ptchd3Q0EEE2 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.13■□□□□ 0.33
Ptchd3Q0EEE2 Gm18284-201ENSMUST00000172604 624 ntBASIC17.13■□□□□ 0.33
Ptchd3Q0EEE2 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.13■□□□□ 0.33
Ptchd3Q0EEE2 Gm18671-201ENSMUST00000214826 683 ntBASIC17.13■□□□□ 0.33
Ptchd3Q0EEE2 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ptchd3Q0EEE2 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Ptchd3Q0EEE2 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ptchd3Q0EEE2 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ptchd3Q0EEE2 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ptchd3Q0EEE2 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ptchd3Q0EEE2 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.13■□□□□ 0.33
Ptchd3Q0EEE2 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ptchd3Q0EEE2 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ptchd3Q0EEE2 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ptchd3Q0EEE2 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ptchd3Q0EEE2 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Ptchd3Q0EEE2 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ptchd3Q0EEE2 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.12■□□□□ 0.33
Ptchd3Q0EEE2 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ptchd3Q0EEE2 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ptchd3Q0EEE2 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ptchd3Q0EEE2 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ptchd3Q0EEE2 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Ptchd3Q0EEE2 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ptchd3Q0EEE2 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ptchd3Q0EEE2 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ptchd3Q0EEE2 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ptchd3Q0EEE2 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ptchd3Q0EEE2 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Ptchd3Q0EEE2 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
Ptchd3Q0EEE2 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ptchd3Q0EEE2 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ptchd3Q0EEE2 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ptchd3Q0EEE2 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ptchd3Q0EEE2 Gm15039-201ENSMUST00000118914 875 ntBASIC17.11■□□□□ 0.33
Ptchd3Q0EEE2 Gm13534-201ENSMUST00000121169 513 ntBASIC17.11■□□□□ 0.33
Ptchd3Q0EEE2 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.11■□□□□ 0.33
Ptchd3Q0EEE2 Gm10033-202ENSMUST00000211874 928 ntBASIC17.11■□□□□ 0.33
Ptchd3Q0EEE2 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ptchd3Q0EEE2 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ptchd3Q0EEE2 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ptchd3Q0EEE2 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ptchd3Q0EEE2 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Ptchd3Q0EEE2 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Ptchd3Q0EEE2 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ptchd3Q0EEE2 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ptchd3Q0EEE2 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.1■□□□□ 0.33
Ptchd3Q0EEE2 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ptchd3Q0EEE2 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms