Protein–RNA interactions for Protein: Q08943

Ssrp1, FACT complex subunit SSRP1, mousemouse

Known RBP Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssrp1Q08943 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ssrp1Q08943 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ssrp1Q08943 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ssrp1Q08943 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Ssrp1Q08943 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ssrp1Q08943 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ssrp1Q08943 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ssrp1Q08943 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC19.75■□□□□ 0.75
Ssrp1Q08943 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.75■□□□□ 0.75
Ssrp1Q08943 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ssrp1Q08943 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ssrp1Q08943 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ssrp1Q08943 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ssrp1Q08943 Gm10602-201ENSMUST00000098239 609 ntBASIC19.75■□□□□ 0.75
Ssrp1Q08943 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ssrp1Q08943 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ssrp1Q08943 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ssrp1Q08943 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ssrp1Q08943 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ssrp1Q08943 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Ssrp1Q08943 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.75■□□□□ 0.75
Ssrp1Q08943 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Ssrp1Q08943 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Ssrp1Q08943 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC19.75■□□□□ 0.75
Ssrp1Q08943 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ssrp1Q08943 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ssrp1Q08943 Zcchc6-207ENSMUST00000225576 2499 ntBASIC19.74■□□□□ 0.75
Ssrp1Q08943 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ssrp1Q08943 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Ssrp1Q08943 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.74■□□□□ 0.75
Ssrp1Q08943 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC19.74■□□□□ 0.75
Ssrp1Q08943 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Ssrp1Q08943 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ssrp1Q08943 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.74■□□□□ 0.75
Ssrp1Q08943 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ssrp1Q08943 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.74■□□□□ 0.75
Ssrp1Q08943 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC19.74■□□□□ 0.75
Ssrp1Q08943 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Ssrp1Q08943 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.74■□□□□ 0.75
Ssrp1Q08943 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ssrp1Q08943 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ssrp1Q08943 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ssrp1Q08943 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ssrp1Q08943 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ssrp1Q08943 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ssrp1Q08943 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ssrp1Q08943 Fcho2-208ENSMUST00000224992 2964 ntBASIC19.73■□□□□ 0.75
Ssrp1Q08943 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ssrp1Q08943 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ssrp1Q08943 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ssrp1Q08943 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ssrp1Q08943 Gm44672-201ENSMUST00000206944 1098 ntBASIC19.73■□□□□ 0.75
Ssrp1Q08943 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Ssrp1Q08943 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ssrp1Q08943 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ssrp1Q08943 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ssrp1Q08943 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ssrp1Q08943 Gm9954-202ENSMUST00000198686 4725 ntBASIC19.73■□□□□ 0.75
Ssrp1Q08943 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Ssrp1Q08943 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.73■□□□□ 0.75
Ssrp1Q08943 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Ssrp1Q08943 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ssrp1Q08943 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ssrp1Q08943 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ssrp1Q08943 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Ssrp1Q08943 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ssrp1Q08943 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ssrp1Q08943 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC19.72■□□□□ 0.75
Ssrp1Q08943 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.72■□□□□ 0.75
Ssrp1Q08943 Idnk-204ENSMUST00000226010 1898 ntBASIC19.72■□□□□ 0.75
Ssrp1Q08943 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ssrp1Q08943 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ssrp1Q08943 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ssrp1Q08943 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC19.71■□□□□ 0.75
Ssrp1Q08943 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ssrp1Q08943 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC19.71■□□□□ 0.75
Ssrp1Q08943 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ssrp1Q08943 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC19.71■□□□□ 0.75
Ssrp1Q08943 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ssrp1Q08943 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Ssrp1Q08943 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.71■□□□□ 0.75
Ssrp1Q08943 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ssrp1Q08943 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ssrp1Q08943 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ssrp1Q08943 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
Ssrp1Q08943 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ssrp1Q08943 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ssrp1Q08943 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Ssrp1Q08943 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ssrp1Q08943 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ssrp1Q08943 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ssrp1Q08943 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ssrp1Q08943 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.7■□□□□ 0.74
Ssrp1Q08943 Gm37194-201ENSMUST00000193092 3031 ntBASIC19.7■□□□□ 0.74
Ssrp1Q08943 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Ssrp1Q08943 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.7■□□□□ 0.74
Ssrp1Q08943 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ssrp1Q08943 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ssrp1Q08943 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ssrp1Q08943 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms