Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smn1P97801 Reep4-203ENSMUST00000226563 1444 ntBASIC15.26■□□□□ 0.03
Smn1P97801 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Smn1P97801 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smn1P97801 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smn1P97801 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Smn1P97801 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC15.25■□□□□ 0.03
Smn1P97801 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Smn1P97801 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smn1P97801 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Smn1P97801 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Smn1P97801 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC15.25■□□□□ 0.03
Smn1P97801 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smn1P97801 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Smn1P97801 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC15.25■□□□□ 0.03
Smn1P97801 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smn1P97801 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smn1P97801 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Smn1P97801 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Smn1P97801 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Smn1P97801 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smn1P97801 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smn1P97801 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Smn1P97801 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Smn1P97801 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smn1P97801 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smn1P97801 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Smn1P97801 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smn1P97801 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Smn1P97801 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smn1P97801 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smn1P97801 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smn1P97801 Gm13146-201ENSMUST00000118508 780 ntBASIC15.24■□□□□ 0.03
Smn1P97801 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Smn1P97801 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Smn1P97801 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smn1P97801 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC15.24■□□□□ 0.03
Smn1P97801 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smn1P97801 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC15.24■□□□□ 0.03
Smn1P97801 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Smn1P97801 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Smn1P97801 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smn1P97801 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smn1P97801 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Smn1P97801 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Smn1P97801 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smn1P97801 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Smn1P97801 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smn1P97801 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Smn1P97801 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smn1P97801 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Smn1P97801 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Smn1P97801 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smn1P97801 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smn1P97801 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smn1P97801 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smn1P97801 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC15.23■□□□□ 0.03
Smn1P97801 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC15.23■□□□□ 0.03
Smn1P97801 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smn1P97801 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smn1P97801 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC15.23■□□□□ 0.03
Smn1P97801 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Smn1P97801 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Smn1P97801 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smn1P97801 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.23■□□□□ 0.03
Smn1P97801 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smn1P97801 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Smn1P97801 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smn1P97801 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smn1P97801 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smn1P97801 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC15.22■□□□□ 0.03
Smn1P97801 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC15.22■□□□□ 0.03
Smn1P97801 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smn1P97801 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Smn1P97801 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smn1P97801 Gm13534-201ENSMUST00000121169 513 ntBASIC15.22■□□□□ 0.03
Smn1P97801 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Smn1P97801 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC15.22■□□□□ 0.03
Smn1P97801 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smn1P97801 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smn1P97801 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smn1P97801 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smn1P97801 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smn1P97801 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Smn1P97801 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Smn1P97801 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smn1P97801 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Smn1P97801 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Smn1P97801 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smn1P97801 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smn1P97801 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Smn1P97801 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smn1P97801 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Smn1P97801 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smn1P97801 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smn1P97801 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smn1P97801 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smn1P97801 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smn1P97801 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Smn1P97801 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms