Protein–RNA interactions for Protein: P97326

Cdh6, Cadherin-6, mousemouse

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh6P97326 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdh6P97326 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Cdh6P97326 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cdh6P97326 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdh6P97326 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.01■□□□□ 0.47
Cdh6P97326 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdh6P97326 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdh6P97326 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
Cdh6P97326 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cdh6P97326 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.01■□□□□ 0.47
Cdh6P97326 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdh6P97326 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdh6P97326 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Cdh6P97326 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdh6P97326 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdh6P97326 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdh6P97326 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cdh6P97326 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Cdh6P97326 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdh6P97326 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cdh6P97326 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cdh6P97326 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Cdh6P97326 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Cdh6P97326 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Cdh6P97326 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Cdh6P97326 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18■□□□□ 0.47
Cdh6P97326 Nrn1-203ENSMUST00000223611 1443 ntBASIC18■□□□□ 0.47
Cdh6P97326 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Cdh6P97326 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cdh6P97326 Gm5643-201ENSMUST00000117081 966 ntBASIC18■□□□□ 0.47
Cdh6P97326 H2-K2-201ENSMUST00000174250 1049 ntBASIC18■□□□□ 0.47
Cdh6P97326 Gm29791-202ENSMUST00000207888 369 ntBASIC18■□□□□ 0.47
Cdh6P97326 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18■□□□□ 0.47
Cdh6P97326 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cdh6P97326 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Cdh6P97326 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
Cdh6P97326 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cdh6P97326 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdh6P97326 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdh6P97326 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdh6P97326 Idnk-204ENSMUST00000226010 1898 ntBASIC17.99■□□□□ 0.47
Cdh6P97326 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.99■□□□□ 0.47
Cdh6P97326 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.99■□□□□ 0.47
Cdh6P97326 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdh6P97326 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdh6P97326 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cdh6P97326 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.99■□□□□ 0.47
Cdh6P97326 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdh6P97326 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.99■□□□□ 0.47
Cdh6P97326 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdh6P97326 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.99■□□□□ 0.47
Cdh6P97326 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdh6P97326 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdh6P97326 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdh6P97326 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
Cdh6P97326 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdh6P97326 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdh6P97326 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Cdh6P97326 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Cdh6P97326 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdh6P97326 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdh6P97326 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdh6P97326 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.98■□□□□ 0.47
Cdh6P97326 Gm11643-201ENSMUST00000119578 864 ntBASIC17.98■□□□□ 0.47
Cdh6P97326 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cdh6P97326 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdh6P97326 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Cdh6P97326 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cdh6P97326 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdh6P97326 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdh6P97326 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdh6P97326 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdh6P97326 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdh6P97326 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdh6P97326 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.98■□□□□ 0.47
Cdh6P97326 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdh6P97326 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdh6P97326 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdh6P97326 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.97■□□□□ 0.47
Cdh6P97326 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdh6P97326 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
Cdh6P97326 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cdh6P97326 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdh6P97326 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.97■□□□□ 0.47
Cdh6P97326 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.97■□□□□ 0.47
Cdh6P97326 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.96■□□□□ 0.47
Cdh6P97326 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cdh6P97326 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.96■□□□□ 0.47
Cdh6P97326 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Cdh6P97326 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cdh6P97326 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Cdh6P97326 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.96■□□□□ 0.47
Cdh6P97326 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.96■□□□□ 0.47
Cdh6P97326 Gm18025-201ENSMUST00000221733 862 ntBASIC17.96■□□□□ 0.47
Cdh6P97326 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cdh6P97326 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Cdh6P97326 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cdh6P97326 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cdh6P97326 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Cdh6P97326 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.96■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms