Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.33■□□□□ 0.68
Trim43cP86449 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC19.33■□□□□ 0.68
Trim43cP86449 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim43cP86449 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim43cP86449 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Trim43cP86449 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Trim43cP86449 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim43cP86449 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Trim43cP86449 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim43cP86449 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim43cP86449 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC19.32■□□□□ 0.68
Trim43cP86449 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim43cP86449 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim43cP86449 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.32■□□□□ 0.68
Trim43cP86449 Gm13401-201ENSMUST00000117074 291 ntBASIC19.32■□□□□ 0.68
Trim43cP86449 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC19.32■□□□□ 0.68
Trim43cP86449 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Trim43cP86449 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Trim43cP86449 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim43cP86449 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim43cP86449 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim43cP86449 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Trim43cP86449 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim43cP86449 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim43cP86449 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim43cP86449 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Trim43cP86449 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim43cP86449 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC19.31■□□□□ 0.68
Trim43cP86449 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim43cP86449 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim43cP86449 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim43cP86449 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim43cP86449 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC19.31■□□□□ 0.68
Trim43cP86449 Mir8112-201ENSMUST00000184382 131 ntBASIC19.31■□□□□ 0.68
Trim43cP86449 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.31■□□□□ 0.68
Trim43cP86449 Gm29791-202ENSMUST00000207888 369 ntBASIC19.31■□□□□ 0.68
Trim43cP86449 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC19.31■□□□□ 0.68
Trim43cP86449 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.31■□□□□ 0.68
Trim43cP86449 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trim43cP86449 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim43cP86449 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim43cP86449 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim43cP86449 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim43cP86449 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim43cP86449 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim43cP86449 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC19.31■□□□□ 0.68
Trim43cP86449 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim43cP86449 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC19.3■□□□□ 0.68
Trim43cP86449 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim43cP86449 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim43cP86449 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim43cP86449 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trim43cP86449 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.3■□□□□ 0.68
Trim43cP86449 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim43cP86449 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim43cP86449 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trim43cP86449 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trim43cP86449 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim43cP86449 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trim43cP86449 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim43cP86449 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim43cP86449 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim43cP86449 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trim43cP86449 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Trim43cP86449 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim43cP86449 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Trim43cP86449 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trim43cP86449 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trim43cP86449 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trim43cP86449 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim43cP86449 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
Trim43cP86449 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim43cP86449 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim43cP86449 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC19.29■□□□□ 0.68
Trim43cP86449 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.29■□□□□ 0.68
Trim43cP86449 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim43cP86449 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim43cP86449 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim43cP86449 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trim43cP86449 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim43cP86449 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim43cP86449 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim43cP86449 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim43cP86449 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim43cP86449 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim43cP86449 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trim43cP86449 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC19.28■□□□□ 0.68
Trim43cP86449 Gm18025-201ENSMUST00000221733 862 ntBASIC19.28■□□□□ 0.68
Trim43cP86449 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim43cP86449 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim43cP86449 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trim43cP86449 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim43cP86449 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trim43cP86449 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim43cP86449 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC19.27■□□□□ 0.68
Trim43cP86449 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.27■□□□□ 0.68
Trim43cP86449 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim43cP86449 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC19.27■□□□□ 0.68
Trim43cP86449 Gm11643-201ENSMUST00000119578 864 ntBASIC19.27■□□□□ 0.68
Trim43cP86449 H2-K2-201ENSMUST00000174250 1049 ntBASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms