Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CiitaP79621 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CiitaP79621 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CiitaP79621 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CiitaP79621 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CiitaP79621 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC19.27■□□□□ 0.68
CiitaP79621 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC19.27■□□□□ 0.68
CiitaP79621 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC19.27■□□□□ 0.68
CiitaP79621 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC19.27■□□□□ 0.68
CiitaP79621 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CiitaP79621 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CiitaP79621 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CiitaP79621 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CiitaP79621 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CiitaP79621 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CiitaP79621 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC19.26■□□□□ 0.67
CiitaP79621 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CiitaP79621 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CiitaP79621 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CiitaP79621 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC19.26■□□□□ 0.67
CiitaP79621 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CiitaP79621 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CiitaP79621 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CiitaP79621 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CiitaP79621 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC19.25■□□□□ 0.67
CiitaP79621 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CiitaP79621 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CiitaP79621 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CiitaP79621 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CiitaP79621 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CiitaP79621 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC19.25■□□□□ 0.67
CiitaP79621 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CiitaP79621 Gm4974-201ENSMUST00000209974 875 ntBASIC19.25■□□□□ 0.67
CiitaP79621 AC135963.1-201ENSMUST00000211640 717 ntBASIC19.25■□□□□ 0.67
CiitaP79621 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CiitaP79621 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CiitaP79621 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CiitaP79621 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CiitaP79621 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CiitaP79621 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC19.25■□□□□ 0.67
CiitaP79621 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CiitaP79621 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CiitaP79621 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.24■□□□□ 0.67
CiitaP79621 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC19.24■□□□□ 0.67
CiitaP79621 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CiitaP79621 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CiitaP79621 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CiitaP79621 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CiitaP79621 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC19.24■□□□□ 0.67
CiitaP79621 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CiitaP79621 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CiitaP79621 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC19.24■□□□□ 0.67
CiitaP79621 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CiitaP79621 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CiitaP79621 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CiitaP79621 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CiitaP79621 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CiitaP79621 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CiitaP79621 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CiitaP79621 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.24■□□□□ 0.67
CiitaP79621 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CiitaP79621 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CiitaP79621 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CiitaP79621 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CiitaP79621 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CiitaP79621 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CiitaP79621 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CiitaP79621 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.23■□□□□ 0.67
CiitaP79621 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CiitaP79621 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CiitaP79621 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CiitaP79621 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC19.23■□□□□ 0.67
CiitaP79621 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CiitaP79621 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC19.23■□□□□ 0.67
CiitaP79621 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC19.23■□□□□ 0.67
CiitaP79621 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC19.23■□□□□ 0.67
CiitaP79621 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CiitaP79621 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CiitaP79621 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CiitaP79621 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.23■□□□□ 0.67
CiitaP79621 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CiitaP79621 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.23■□□□□ 0.67
CiitaP79621 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CiitaP79621 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CiitaP79621 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CiitaP79621 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CiitaP79621 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CiitaP79621 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CiitaP79621 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CiitaP79621 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CiitaP79621 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CiitaP79621 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CiitaP79621 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC19.22■□□□□ 0.67
CiitaP79621 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC19.22■□□□□ 0.67
CiitaP79621 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CiitaP79621 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CiitaP79621 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC19.22■□□□□ 0.67
CiitaP79621 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CiitaP79621 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CiitaP79621 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms