Protein–RNA interactions for Protein: P70196

Traf6, TNF receptor-associated factor 6, mousemouse

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf6P70196 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Traf6P70196 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.48■□□□□ 0.39
Traf6P70196 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Traf6P70196 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Traf6P70196 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Traf6P70196 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Traf6P70196 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Traf6P70196 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Traf6P70196 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Traf6P70196 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Traf6P70196 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
Traf6P70196 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Traf6P70196 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Traf6P70196 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Traf6P70196 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Traf6P70196 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Traf6P70196 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Traf6P70196 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
Traf6P70196 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Traf6P70196 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Traf6P70196 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.47■□□□□ 0.39
Traf6P70196 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.46■□□□□ 0.39
Traf6P70196 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Traf6P70196 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Traf6P70196 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Traf6P70196 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.46■□□□□ 0.39
Traf6P70196 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Traf6P70196 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Traf6P70196 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Traf6P70196 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.46■□□□□ 0.39
Traf6P70196 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Traf6P70196 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Traf6P70196 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Traf6P70196 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Traf6P70196 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Traf6P70196 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Traf6P70196 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.45■□□□□ 0.38
Traf6P70196 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.45■□□□□ 0.38
Traf6P70196 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Traf6P70196 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Traf6P70196 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Traf6P70196 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Traf6P70196 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Traf6P70196 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Traf6P70196 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Traf6P70196 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Traf6P70196 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Traf6P70196 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Traf6P70196 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.44■□□□□ 0.38
Traf6P70196 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Traf6P70196 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Traf6P70196 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
Traf6P70196 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.44■□□□□ 0.38
Traf6P70196 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Traf6P70196 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Traf6P70196 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Traf6P70196 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.44■□□□□ 0.38
Traf6P70196 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Traf6P70196 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Traf6P70196 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.44■□□□□ 0.38
Traf6P70196 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Traf6P70196 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Traf6P70196 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Traf6P70196 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Traf6P70196 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Traf6P70196 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Traf6P70196 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Traf6P70196 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Traf6P70196 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Traf6P70196 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Traf6P70196 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Traf6P70196 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Traf6P70196 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.43■□□□□ 0.38
Traf6P70196 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
Traf6P70196 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Traf6P70196 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Traf6P70196 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC17.43■□□□□ 0.38
Traf6P70196 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.43■□□□□ 0.38
Traf6P70196 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.43■□□□□ 0.38
Traf6P70196 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.43■□□□□ 0.38
Traf6P70196 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Traf6P70196 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Traf6P70196 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Traf6P70196 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Traf6P70196 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Traf6P70196 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.43■□□□□ 0.38
Traf6P70196 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Traf6P70196 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Traf6P70196 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Traf6P70196 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Traf6P70196 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.42■□□□□ 0.38
Traf6P70196 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Traf6P70196 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Traf6P70196 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.42■□□□□ 0.38
Traf6P70196 Gm37179-201ENSMUST00000194862 823 ntBASIC17.42■□□□□ 0.38
Traf6P70196 Gm5297-201ENSMUST00000198555 1171 ntBASIC17.42■□□□□ 0.38
Traf6P70196 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.42■□□□□ 0.38
Traf6P70196 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.42■□□□□ 0.38
Traf6P70196 Gm6365-201ENSMUST00000054711 744 ntBASIC17.42■□□□□ 0.38
Traf6P70196 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms