Protein–RNA interactions for Protein: P68404

Prkcb, Protein kinase C beta type, mousemouse

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkcbP68404 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PrkcbP68404 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PrkcbP68404 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PrkcbP68404 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PrkcbP68404 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PrkcbP68404 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PrkcbP68404 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PrkcbP68404 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
PrkcbP68404 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PrkcbP68404 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PrkcbP68404 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PrkcbP68404 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PrkcbP68404 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PrkcbP68404 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PrkcbP68404 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PrkcbP68404 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PrkcbP68404 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
PrkcbP68404 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC19.2■□□□□ 0.66
PrkcbP68404 Gm10517-202ENSMUST00000192970 758 ntBASIC19.2■□□□□ 0.66
PrkcbP68404 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC19.2■□□□□ 0.66
PrkcbP68404 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PrkcbP68404 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PrkcbP68404 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
PrkcbP68404 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
PrkcbP68404 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
PrkcbP68404 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PrkcbP68404 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PrkcbP68404 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PrkcbP68404 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PrkcbP68404 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PrkcbP68404 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PrkcbP68404 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PrkcbP68404 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PrkcbP68404 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PrkcbP68404 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.19■□□□□ 0.66
PrkcbP68404 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.19■□□□□ 0.66
PrkcbP68404 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PrkcbP68404 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PrkcbP68404 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PrkcbP68404 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PrkcbP68404 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.18■□□□□ 0.66
PrkcbP68404 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PrkcbP68404 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.18■□□□□ 0.66
PrkcbP68404 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PrkcbP68404 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PrkcbP68404 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PrkcbP68404 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PrkcbP68404 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.18■□□□□ 0.66
PrkcbP68404 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
PrkcbP68404 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PrkcbP68404 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
PrkcbP68404 Arhgef4-208ENSMUST00000211073 171 ntBASIC19.18■□□□□ 0.66
PrkcbP68404 AC156016.1-201ENSMUST00000227190 1035 ntBASIC19.18■□□□□ 0.66
PrkcbP68404 Gm5417-201ENSMUST00000079706 384 ntBASIC19.18■□□□□ 0.66
PrkcbP68404 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PrkcbP68404 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
PrkcbP68404 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PrkcbP68404 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PrkcbP68404 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PrkcbP68404 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
PrkcbP68404 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PrkcbP68404 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
PrkcbP68404 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC19.17■□□□□ 0.66
PrkcbP68404 Timm23-208ENSMUST00000226683 750 ntBASIC19.17■□□□□ 0.66
PrkcbP68404 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PrkcbP68404 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PrkcbP68404 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
PrkcbP68404 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
PrkcbP68404 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PrkcbP68404 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PrkcbP68404 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.17■□□□□ 0.66
PrkcbP68404 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PrkcbP68404 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PrkcbP68404 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PrkcbP68404 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PrkcbP68404 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PrkcbP68404 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PrkcbP68404 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PrkcbP68404 Gm21814-202ENSMUST00000203277 873 ntBASIC19.16■□□□□ 0.66
PrkcbP68404 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC19.16■□□□□ 0.66
PrkcbP68404 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PrkcbP68404 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
PrkcbP68404 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PrkcbP68404 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.16■□□□□ 0.66
PrkcbP68404 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PrkcbP68404 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.16■□□□□ 0.66
PrkcbP68404 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PrkcbP68404 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PrkcbP68404 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PrkcbP68404 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PrkcbP68404 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PrkcbP68404 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PrkcbP68404 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PrkcbP68404 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PrkcbP68404 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC19.15■□□□□ 0.66
PrkcbP68404 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PrkcbP68404 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PrkcbP68404 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PrkcbP68404 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC19.15■□□□□ 0.66
PrkcbP68404 Gm20472-201ENSMUST00000174403 1240 ntBASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms