Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Sec61a1P61620 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sec61a1P61620 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Sec61a1P61620 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Sec61a1P61620 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sec61a1P61620 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sec61a1P61620 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Sec61a1P61620 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sec61a1P61620 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sec61a1P61620 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.62■□□□□ 0.09
Sec61a1P61620 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sec61a1P61620 Gm38308-201ENSMUST00000194934 1809 ntBASIC15.62■□□□□ 0.09
Sec61a1P61620 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sec61a1P61620 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Sec61a1P61620 CT025689.6-201ENSMUST00000224991 1104 ntBASIC15.62■□□□□ 0.09
Sec61a1P61620 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sec61a1P61620 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Sec61a1P61620 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Sec61a1P61620 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Sec61a1P61620 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Sec61a1P61620 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sec61a1P61620 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sec61a1P61620 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sec61a1P61620 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Sec61a1P61620 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sec61a1P61620 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sec61a1P61620 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sec61a1P61620 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Sec61a1P61620 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Sec61a1P61620 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sec61a1P61620 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sec61a1P61620 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC15.61■□□□□ 0.09
Sec61a1P61620 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Sec61a1P61620 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
Sec61a1P61620 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sec61a1P61620 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sec61a1P61620 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC15.61■□□□□ 0.09
Sec61a1P61620 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sec61a1P61620 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sec61a1P61620 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sec61a1P61620 Gm10655-201ENSMUST00000098658 1397 ntBASIC15.61■□□□□ 0.09
Sec61a1P61620 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sec61a1P61620 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sec61a1P61620 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Sec61a1P61620 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sec61a1P61620 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sec61a1P61620 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sec61a1P61620 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sec61a1P61620 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Sec61a1P61620 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sec61a1P61620 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sec61a1P61620 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sec61a1P61620 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sec61a1P61620 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Sec61a1P61620 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC15.6■□□□□ 0.09
Sec61a1P61620 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Sec61a1P61620 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sec61a1P61620 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sec61a1P61620 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sec61a1P61620 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sec61a1P61620 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sec61a1P61620 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sec61a1P61620 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
Sec61a1P61620 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sec61a1P61620 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sec61a1P61620 Gm15743-202ENSMUST00000182690 1901 ntBASIC15.6■□□□□ 0.09
Sec61a1P61620 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sec61a1P61620 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sec61a1P61620 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Sec61a1P61620 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sec61a1P61620 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sec61a1P61620 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sec61a1P61620 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Sec61a1P61620 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sec61a1P61620 Gm43294-201ENSMUST00000202850 2490 ntBASIC15.59■□□□□ 0.09
Sec61a1P61620 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sec61a1P61620 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Sec61a1P61620 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sec61a1P61620 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Sec61a1P61620 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sec61a1P61620 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sec61a1P61620 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC15.59■□□□□ 0.09
Sec61a1P61620 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sec61a1P61620 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sec61a1P61620 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC15.59■□□□□ 0.09
Sec61a1P61620 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sec61a1P61620 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sec61a1P61620 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sec61a1P61620 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sec61a1P61620 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sec61a1P61620 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sec61a1P61620 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Sec61a1P61620 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC15.59■□□□□ 0.09
Sec61a1P61620 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sec61a1P61620 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
Sec61a1P61620 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC15.58■□□□□ 0.09
Sec61a1P61620 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
Sec61a1P61620 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Sec61a1P61620 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Sec61a1P61620 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms