Protein–RNA interactions for Protein: P56477

Irf5, Interferon regulatory factor 5, mousemouse

Predictions only

Length 497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf5P56477 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC21■□□□□ 0.95
Irf5P56477 Gm21814-202ENSMUST00000203277 873 ntBASIC21■□□□□ 0.95
Irf5P56477 Gm8668-201ENSMUST00000120559 1447 ntBASIC21■□□□□ 0.95
Irf5P56477 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Irf5P56477 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Irf5P56477 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Irf5P56477 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Irf5P56477 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Irf5P56477 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Irf5P56477 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Irf5P56477 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC20.99■□□□□ 0.95
Irf5P56477 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
Irf5P56477 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Irf5P56477 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Irf5P56477 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Irf5P56477 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Irf5P56477 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Irf5P56477 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Irf5P56477 Gm15635-204ENSMUST00000208024 2539 ntBASIC20.98■□□□□ 0.95
Irf5P56477 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC20.98■□□□□ 0.95
Irf5P56477 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Irf5P56477 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Irf5P56477 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Irf5P56477 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Irf5P56477 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Irf5P56477 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Irf5P56477 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Irf5P56477 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Irf5P56477 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Irf5P56477 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Irf5P56477 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Irf5P56477 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Irf5P56477 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Irf5P56477 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Irf5P56477 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Irf5P56477 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.97■□□□□ 0.95
Irf5P56477 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC20.97■□□□□ 0.95
Irf5P56477 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
Irf5P56477 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC20.97■□□□□ 0.95
Irf5P56477 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC20.97■□□□□ 0.95
Irf5P56477 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Irf5P56477 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Irf5P56477 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Irf5P56477 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Irf5P56477 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Irf5P56477 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Irf5P56477 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Irf5P56477 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Irf5P56477 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
Irf5P56477 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Irf5P56477 Mir6349-201ENSMUST00000184059 97 ntBASIC20.96■□□□□ 0.95
Irf5P56477 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Irf5P56477 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Irf5P56477 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Irf5P56477 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC20.96■□□□□ 0.95
Irf5P56477 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Irf5P56477 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
Irf5P56477 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Irf5P56477 Gm42922-201ENSMUST00000195887 2078 ntBASIC20.95■□□□□ 0.94
Irf5P56477 Gm15375-201ENSMUST00000119510 849 ntBASIC20.95■□□□□ 0.94
Irf5P56477 Gm21362-201ENSMUST00000194272 928 ntBASIC20.95■□□□□ 0.94
Irf5P56477 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Irf5P56477 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Irf5P56477 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Irf5P56477 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Irf5P56477 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Irf5P56477 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Irf5P56477 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Irf5P56477 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Irf5P56477 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC20.94■□□□□ 0.94
Irf5P56477 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Irf5P56477 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Irf5P56477 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Irf5P56477 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Irf5P56477 Gm5898-201ENSMUST00000121016 2071 ntBASIC20.93■□□□□ 0.94
Irf5P56477 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Irf5P56477 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Irf5P56477 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Irf5P56477 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
Irf5P56477 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Irf5P56477 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Irf5P56477 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC20.93■□□□□ 0.94
Irf5P56477 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Irf5P56477 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Irf5P56477 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC20.93■□□□□ 0.94
Irf5P56477 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Irf5P56477 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Irf5P56477 AC124581.1-201ENSMUST00000225416 1399 ntBASIC20.93■□□□□ 0.94
Irf5P56477 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Irf5P56477 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Irf5P56477 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Irf5P56477 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Irf5P56477 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Irf5P56477 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC20.92■□□□□ 0.94
Irf5P56477 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Irf5P56477 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Irf5P56477 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Irf5P56477 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC20.92■□□□□ 0.94
Irf5P56477 Gm10819-201ENSMUST00000099988 561 ntBASIC20.92■□□□□ 0.94
Irf5P56477 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms