Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Atxn1P54254 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.62■□□□□ 0.41
Atxn1P54254 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Atxn1P54254 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Atxn1P54254 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Atxn1P54254 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Atxn1P54254 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.62■□□□□ 0.41
Atxn1P54254 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Atxn1P54254 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Atxn1P54254 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atxn1P54254 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Atxn1P54254 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atxn1P54254 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atxn1P54254 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atxn1P54254 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.61■□□□□ 0.41
Atxn1P54254 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.61■□□□□ 0.41
Atxn1P54254 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atxn1P54254 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atxn1P54254 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atxn1P54254 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atxn1P54254 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Atxn1P54254 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Atxn1P54254 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atxn1P54254 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atxn1P54254 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Atxn1P54254 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Atxn1P54254 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Atxn1P54254 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Atxn1P54254 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.6■□□□□ 0.41
Atxn1P54254 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Atxn1P54254 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Atxn1P54254 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Atxn1P54254 Zfp783-201ENSMUST00000095946 670 ntBASIC17.6■□□□□ 0.41
Atxn1P54254 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Atxn1P54254 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.6■□□□□ 0.41
Atxn1P54254 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Atxn1P54254 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Atxn1P54254 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Atxn1P54254 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Atxn1P54254 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Atxn1P54254 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
Atxn1P54254 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Atxn1P54254 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Atxn1P54254 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Atxn1P54254 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Atxn1P54254 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Atxn1P54254 Gm5867-201ENSMUST00000063197 592 ntBASIC17.59■□□□□ 0.41
Atxn1P54254 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Atxn1P54254 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Atxn1P54254 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Atxn1P54254 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Atxn1P54254 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Atxn1P54254 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Atxn1P54254 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Atxn1P54254 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.58■□□□□ 0.41
Atxn1P54254 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Atxn1P54254 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Atxn1P54254 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.58■□□□□ 0.4
Atxn1P54254 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Atxn1P54254 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Atxn1P54254 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Atxn1P54254 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Atxn1P54254 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Atxn1P54254 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Atxn1P54254 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Atxn1P54254 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Atxn1P54254 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Atxn1P54254 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Atxn1P54254 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Atxn1P54254 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Atxn1P54254 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Atxn1P54254 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Atxn1P54254 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Atxn1P54254 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Atxn1P54254 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Atxn1P54254 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Atxn1P54254 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Atxn1P54254 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Atxn1P54254 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.57■□□□□ 0.4
Atxn1P54254 Gm17661-201ENSMUST00000170317 270 ntBASIC17.57■□□□□ 0.4
Atxn1P54254 Mir5130-201ENSMUST00000175160 84 ntBASIC17.57■□□□□ 0.4
Atxn1P54254 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Atxn1P54254 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Atxn1P54254 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.57■□□□□ 0.4
Atxn1P54254 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Atxn1P54254 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Atxn1P54254 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Atxn1P54254 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Atxn1P54254 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Atxn1P54254 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Atxn1P54254 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Atxn1P54254 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Atxn1P54254 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Atxn1P54254 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Atxn1P54254 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.56■□□□□ 0.4
Atxn1P54254 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Atxn1P54254 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Atxn1P54254 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.56■□□□□ 0.4
Atxn1P54254 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.56■□□□□ 0.4
Atxn1P54254 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms