Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sox1P53783 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Sox1P53783 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Sox1P53783 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sox1P53783 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Sox1P53783 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
Sox1P53783 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC18.15■□□□□ 0.5
Sox1P53783 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC18.15■□□□□ 0.5
Sox1P53783 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sox1P53783 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sox1P53783 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sox1P53783 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Sox1P53783 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.14■□□□□ 0.5
Sox1P53783 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Sox1P53783 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sox1P53783 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.14■□□□□ 0.49
Sox1P53783 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC18.14■□□□□ 0.49
Sox1P53783 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sox1P53783 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sox1P53783 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sox1P53783 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Sox1P53783 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Sox1P53783 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sox1P53783 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sox1P53783 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sox1P53783 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sox1P53783 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sox1P53783 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Sox1P53783 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Sox1P53783 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Sox1P53783 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Sox1P53783 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sox1P53783 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sox1P53783 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Sox1P53783 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Sox1P53783 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC18.13■□□□□ 0.49
Sox1P53783 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Sox1P53783 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sox1P53783 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Sox1P53783 Gm8784-201ENSMUST00000222096 1435 ntBASIC18.13■□□□□ 0.49
Sox1P53783 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sox1P53783 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.13■□□□□ 0.49
Sox1P53783 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.12■□□□□ 0.49
Sox1P53783 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sox1P53783 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sox1P53783 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sox1P53783 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sox1P53783 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
Sox1P53783 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC18.12■□□□□ 0.49
Sox1P53783 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
Sox1P53783 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC18.12■□□□□ 0.49
Sox1P53783 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sox1P53783 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Sox1P53783 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Sox1P53783 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sox1P53783 AC131586.3-201ENSMUST00000228355 1367 ntBASIC18.12■□□□□ 0.49
Sox1P53783 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sox1P53783 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.12■□□□□ 0.49
Sox1P53783 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
Sox1P53783 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Sox1P53783 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Sox1P53783 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sox1P53783 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Sox1P53783 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Sox1P53783 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Sox1P53783 AC138767.1-201ENSMUST00000222661 415 ntBASIC18.11■□□□□ 0.49
Sox1P53783 AC159301.1-201ENSMUST00000225130 1182 ntBASIC18.11■□□□□ 0.49
Sox1P53783 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sox1P53783 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sox1P53783 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sox1P53783 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sox1P53783 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Sox1P53783 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.11■□□□□ 0.49
Sox1P53783 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
Sox1P53783 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Sox1P53783 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sox1P53783 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sox1P53783 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.1■□□□□ 0.49
Sox1P53783 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Sox1P53783 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sox1P53783 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sox1P53783 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC18.1■□□□□ 0.49
Sox1P53783 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Sox1P53783 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Sox1P53783 Gm37722-201ENSMUST00000193757 208 ntBASIC18.1■□□□□ 0.49
Sox1P53783 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.1■□□□□ 0.49
Sox1P53783 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sox1P53783 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sox1P53783 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sox1P53783 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sox1P53783 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Sox1P53783 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sox1P53783 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sox1P53783 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sox1P53783 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Sox1P53783 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC18.09■□□□□ 0.49
Sox1P53783 Gm15794-201ENSMUST00000120182 631 ntBASIC18.09■□□□□ 0.49
Sox1P53783 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Sox1P53783 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC18.09■□□□□ 0.49
Sox1P53783 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms