Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Lbx1P52955 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lbx1P52955 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC17.16■□□□□ 0.34
Lbx1P52955 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC17.16■□□□□ 0.34
Lbx1P52955 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC17.16■□□□□ 0.34
Lbx1P52955 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.16■□□□□ 0.34
Lbx1P52955 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC17.16■□□□□ 0.34
Lbx1P52955 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Lbx1P52955 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lbx1P52955 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.16■□□□□ 0.34
Lbx1P52955 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lbx1P52955 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Lbx1P52955 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lbx1P52955 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lbx1P52955 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Lbx1P52955 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.15■□□□□ 0.34
Lbx1P52955 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC17.15■□□□□ 0.34
Lbx1P52955 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Lbx1P52955 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Lbx1P52955 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC17.15■□□□□ 0.34
Lbx1P52955 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Lbx1P52955 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC17.15■□□□□ 0.34
Lbx1P52955 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC17.15■□□□□ 0.34
Lbx1P52955 Ighv6-1-201ENSMUST00000193612 343 ntBASIC17.15■□□□□ 0.34
Lbx1P52955 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lbx1P52955 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Lbx1P52955 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.15■□□□□ 0.34
Lbx1P52955 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Lbx1P52955 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lbx1P52955 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lbx1P52955 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lbx1P52955 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Lbx1P52955 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lbx1P52955 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC17.14■□□□□ 0.33
Lbx1P52955 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Lbx1P52955 Gm26039-201ENSMUST00000158152 144 ntBASIC17.14■□□□□ 0.33
Lbx1P52955 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC17.14■□□□□ 0.33
Lbx1P52955 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC17.14■□□□□ 0.33
Lbx1P52955 AC158982.1-201ENSMUST00000228377 901 ntBASIC17.14■□□□□ 0.33
Lbx1P52955 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Lbx1P52955 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Lbx1P52955 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Lbx1P52955 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lbx1P52955 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lbx1P52955 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lbx1P52955 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
Lbx1P52955 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Lbx1P52955 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Lbx1P52955 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lbx1P52955 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lbx1P52955 Gm15467-201ENSMUST00000120582 445 ntBASIC17.13■□□□□ 0.33
Lbx1P52955 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC17.13■□□□□ 0.33
Lbx1P52955 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lbx1P52955 Gm24513-201ENSMUST00000174964 138 ntBASIC17.13■□□□□ 0.33
Lbx1P52955 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Lbx1P52955 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC17.13■□□□□ 0.33
Lbx1P52955 Gm27397-201ENSMUST00000184997 107 ntBASIC17.13■□□□□ 0.33
Lbx1P52955 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Lbx1P52955 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lbx1P52955 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC17.13■□□□□ 0.33
Lbx1P52955 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lbx1P52955 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lbx1P52955 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Lbx1P52955 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lbx1P52955 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lbx1P52955 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lbx1P52955 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lbx1P52955 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lbx1P52955 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Lbx1P52955 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lbx1P52955 Gm7638-201ENSMUST00000121348 967 ntBASIC17.12■□□□□ 0.33
Lbx1P52955 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC17.12■□□□□ 0.33
Lbx1P52955 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lbx1P52955 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lbx1P52955 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lbx1P52955 Rps4l-201ENSMUST00000071745 943 ntBASIC17.12■□□□□ 0.33
Lbx1P52955 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lbx1P52955 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lbx1P52955 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lbx1P52955 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Lbx1P52955 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lbx1P52955 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.12■□□□□ 0.33
Lbx1P52955 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lbx1P52955 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Lbx1P52955 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Lbx1P52955 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lbx1P52955 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Lbx1P52955 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lbx1P52955 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC17.11■□□□□ 0.33
Lbx1P52955 Gm14822-201ENSMUST00000122247 291 ntBASIC17.11■□□□□ 0.33
Lbx1P52955 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.11■□□□□ 0.33
Lbx1P52955 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.11■□□□□ 0.33
Lbx1P52955 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
Lbx1P52955 Gm1818-201ENSMUST00000169406 1184 ntBASIC17.11■□□□□ 0.33
Lbx1P52955 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC17.11■□□□□ 0.33
Lbx1P52955 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC17.11■□□□□ 0.33
Lbx1P52955 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lbx1P52955 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lbx1P52955 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lbx1P52955 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms