Protein–RNA interactions for Protein: P50446

Krt6a, Keratin, type II cytoskeletal 6A, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt6aP50446 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Krt6aP50446 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Krt6aP50446 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Krt6aP50446 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Krt6aP50446 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Krt6aP50446 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Krt6aP50446 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Krt6aP50446 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Krt6aP50446 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Krt6aP50446 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Krt6aP50446 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Krt6aP50446 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
Krt6aP50446 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Krt6aP50446 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Krt6aP50446 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.64■□□□□ 0.41
Krt6aP50446 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Krt6aP50446 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Krt6aP50446 Gm7514-201ENSMUST00000209475 934 ntBASIC17.64■□□□□ 0.41
Krt6aP50446 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Krt6aP50446 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Krt6aP50446 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Krt6aP50446 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Krt6aP50446 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.64■□□□□ 0.41
Krt6aP50446 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Krt6aP50446 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Krt6aP50446 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Krt6aP50446 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Krt6aP50446 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Krt6aP50446 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Krt6aP50446 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Krt6aP50446 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Krt6aP50446 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Krt6aP50446 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Krt6aP50446 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Krt6aP50446 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Krt6aP50446 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Krt6aP50446 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Krt6aP50446 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Krt6aP50446 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Krt6aP50446 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Krt6aP50446 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Krt6aP50446 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Krt6aP50446 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Krt6aP50446 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Krt6aP50446 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Krt6aP50446 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Krt6aP50446 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Krt6aP50446 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Krt6aP50446 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Krt6aP50446 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Krt6aP50446 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Krt6aP50446 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Krt6aP50446 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Krt6aP50446 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
Krt6aP50446 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Krt6aP50446 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
Krt6aP50446 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.62■□□□□ 0.41
Krt6aP50446 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Krt6aP50446 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.62■□□□□ 0.41
Krt6aP50446 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Krt6aP50446 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Krt6aP50446 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Krt6aP50446 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Krt6aP50446 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Krt6aP50446 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Krt6aP50446 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Krt6aP50446 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Krt6aP50446 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Krt6aP50446 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Krt6aP50446 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Krt6aP50446 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Krt6aP50446 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Krt6aP50446 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Krt6aP50446 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC17.61■□□□□ 0.41
Krt6aP50446 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Krt6aP50446 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.61■□□□□ 0.41
Krt6aP50446 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Krt6aP50446 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Krt6aP50446 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.61■□□□□ 0.41
Krt6aP50446 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Krt6aP50446 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Krt6aP50446 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Krt6aP50446 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Krt6aP50446 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Krt6aP50446 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.61■□□□□ 0.41
Krt6aP50446 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Krt6aP50446 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Krt6aP50446 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Krt6aP50446 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Krt6aP50446 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Krt6aP50446 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Krt6aP50446 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.6■□□□□ 0.41
Krt6aP50446 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.6■□□□□ 0.41
Krt6aP50446 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Krt6aP50446 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Krt6aP50446 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Krt6aP50446 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.6■□□□□ 0.41
Krt6aP50446 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Krt6aP50446 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Krt6aP50446 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms