Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Msh2P43247 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Msh2P43247 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Msh2P43247 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Msh2P43247 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.31■□□□□ 0.52
Msh2P43247 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Msh2P43247 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Msh2P43247 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Msh2P43247 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Msh2P43247 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Msh2P43247 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Msh2P43247 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Msh2P43247 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.3■□□□□ 0.52
Msh2P43247 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Msh2P43247 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Msh2P43247 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.3■□□□□ 0.52
Msh2P43247 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Msh2P43247 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Msh2P43247 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.3■□□□□ 0.52
Msh2P43247 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Msh2P43247 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.29■□□□□ 0.52
Msh2P43247 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Msh2P43247 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Msh2P43247 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Msh2P43247 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Msh2P43247 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Msh2P43247 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Msh2P43247 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Msh2P43247 Gm12933-201ENSMUST00000120203 872 ntBASIC18.29■□□□□ 0.52
Msh2P43247 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.29■□□□□ 0.52
Msh2P43247 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
Msh2P43247 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.29■□□□□ 0.52
Msh2P43247 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Msh2P43247 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Msh2P43247 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Msh2P43247 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Msh2P43247 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Msh2P43247 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Msh2P43247 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Msh2P43247 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.28■□□□□ 0.52
Msh2P43247 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.28■□□□□ 0.52
Msh2P43247 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Msh2P43247 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Msh2P43247 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
Msh2P43247 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Msh2P43247 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Msh2P43247 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Msh2P43247 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Msh2P43247 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Msh2P43247 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Msh2P43247 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Msh2P43247 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Msh2P43247 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Msh2P43247 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
Msh2P43247 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Msh2P43247 Gm7290-201ENSMUST00000104990 617 ntBASIC18.27■□□□□ 0.52
Msh2P43247 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Msh2P43247 Gm12918-201ENSMUST00000120234 636 ntBASIC18.27■□□□□ 0.52
Msh2P43247 Gm15710-201ENSMUST00000121821 636 ntBASIC18.27■□□□□ 0.52
Msh2P43247 Gm5075-201ENSMUST00000196916 622 ntBASIC18.27■□□□□ 0.52
Msh2P43247 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Msh2P43247 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.27■□□□□ 0.52
Msh2P43247 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.27■□□□□ 0.52
Msh2P43247 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Msh2P43247 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Msh2P43247 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Msh2P43247 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Msh2P43247 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Msh2P43247 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Msh2P43247 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Msh2P43247 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Msh2P43247 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Msh2P43247 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Msh2P43247 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Msh2P43247 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Msh2P43247 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Msh2P43247 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Msh2P43247 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Msh2P43247 Mir5133-201ENSMUST00000174955 77 ntBASIC18.26■□□□□ 0.51
Msh2P43247 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.26■□□□□ 0.51
Msh2P43247 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Msh2P43247 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Msh2P43247 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Msh2P43247 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Msh2P43247 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Msh2P43247 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Msh2P43247 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
Msh2P43247 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Msh2P43247 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Msh2P43247 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
Msh2P43247 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Msh2P43247 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Msh2P43247 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Msh2P43247 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Msh2P43247 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Msh2P43247 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Msh2P43247 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Msh2P43247 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Msh2P43247 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.25■□□□□ 0.51
Msh2P43247 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 69.9 ms