Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HttP42859 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HttP42859 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HttP42859 Gm43575-201ENSMUST00000196420 516 ntBASIC19.07■□□□□ 0.64
HttP42859 Gm18195-201ENSMUST00000207604 706 ntBASIC19.07■□□□□ 0.64
HttP42859 Rps4l-201ENSMUST00000071745 943 ntBASIC19.07■□□□□ 0.64
HttP42859 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
HttP42859 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HttP42859 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HttP42859 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HttP42859 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HttP42859 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HttP42859 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
HttP42859 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HttP42859 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
HttP42859 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
HttP42859 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
HttP42859 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HttP42859 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HttP42859 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC19.06■□□□□ 0.64
HttP42859 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC19.06■□□□□ 0.64
HttP42859 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HttP42859 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HttP42859 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
HttP42859 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
HttP42859 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HttP42859 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HttP42859 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HttP42859 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
HttP42859 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HttP42859 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
HttP42859 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
HttP42859 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HttP42859 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HttP42859 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HttP42859 Gm37722-201ENSMUST00000193757 208 ntBASIC19.05■□□□□ 0.64
HttP42859 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HttP42859 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HttP42859 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
HttP42859 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.05■□□□□ 0.64
HttP42859 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HttP42859 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HttP42859 Gm27702-201ENSMUST00000184512 56 ntBASIC19.05■□□□□ 0.64
HttP42859 AC161829.1-201ENSMUST00000220298 281 ntBASIC19.05■□□□□ 0.64
HttP42859 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
HttP42859 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
HttP42859 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
HttP42859 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HttP42859 Gm23935-201ENSMUST00000102303 57 ntBASIC19.05■□□□□ 0.64
HttP42859 Gm24270-201ENSMUST00000102326 57 ntBASIC19.05■□□□□ 0.64
HttP42859 Gm24245-201ENSMUST00000157318 57 ntBASIC19.05■□□□□ 0.64
HttP42859 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC19.05■□□□□ 0.64
HttP42859 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC19.05■□□□□ 0.64
HttP42859 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HttP42859 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HttP42859 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
HttP42859 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HttP42859 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HttP42859 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
HttP42859 Gm38345-201ENSMUST00000192635 1748 ntBASIC19.04■□□□□ 0.64
HttP42859 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HttP42859 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HttP42859 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HttP42859 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HttP42859 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
HttP42859 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HttP42859 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
HttP42859 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
HttP42859 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC19.03■□□□□ 0.64
HttP42859 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HttP42859 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
HttP42859 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
HttP42859 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
HttP42859 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
HttP42859 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HttP42859 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC19.03■□□□□ 0.64
HttP42859 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC19.03■□□□□ 0.64
HttP42859 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
HttP42859 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HttP42859 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HttP42859 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HttP42859 Golph3-205ENSMUST00000228671 2842 ntBASIC19.03■□□□□ 0.64
HttP42859 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
HttP42859 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HttP42859 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HttP42859 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HttP42859 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HttP42859 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HttP42859 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC19.02■□□□□ 0.64
HttP42859 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HttP42859 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HttP42859 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HttP42859 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
HttP42859 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
HttP42859 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC19.02■□□□□ 0.63
HttP42859 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC19.02■□□□□ 0.63
HttP42859 Gm24841-201ENSMUST00000158676 357 ntBASIC19.02■□□□□ 0.63
HttP42859 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
HttP42859 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
HttP42859 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms