Protein–RNA interactions for Protein: P41272

Cd27, CD27 antigen, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd27P41272 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cd27P41272 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC14.23□□□□□ -0.13
Cd27P41272 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cd27P41272 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cd27P41272 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cd27P41272 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cd27P41272 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cd27P41272 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cd27P41272 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC14.22□□□□□ -0.13
Cd27P41272 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cd27P41272 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cd27P41272 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cd27P41272 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Cd27P41272 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC14.22□□□□□ -0.13
Cd27P41272 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC14.22□□□□□ -0.13
Cd27P41272 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cd27P41272 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cd27P41272 Gm37292-201ENSMUST00000192062 758 ntBASIC14.22□□□□□ -0.13
Cd27P41272 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cd27P41272 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC14.22□□□□□ -0.13
Cd27P41272 Gm29791-202ENSMUST00000207888 369 ntBASIC14.22□□□□□ -0.13
Cd27P41272 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cd27P41272 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cd27P41272 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cd27P41272 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cd27P41272 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cd27P41272 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC14.21□□□□□ -0.13
Cd27P41272 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cd27P41272 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cd27P41272 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cd27P41272 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cd27P41272 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC14.21□□□□□ -0.13
Cd27P41272 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cd27P41272 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Cd27P41272 AC166341.7-201ENSMUST00000221698 126 ntBASIC14.21□□□□□ -0.13
Cd27P41272 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cd27P41272 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cd27P41272 AC154231.1-201ENSMUST00000220564 2175 ntBASIC14.21□□□□□ -0.13
Cd27P41272 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cd27P41272 Gm44832-201ENSMUST00000208849 2303 ntBASIC14.21□□□□□ -0.13
Cd27P41272 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cd27P41272 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cd27P41272 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cd27P41272 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cd27P41272 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC14.2□□□□□ -0.14
Cd27P41272 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cd27P41272 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cd27P41272 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cd27P41272 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Cd27P41272 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cd27P41272 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cd27P41272 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cd27P41272 Gm8520-201ENSMUST00000186517 868 ntBASIC14.2□□□□□ -0.14
Cd27P41272 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC14.2□□□□□ -0.14
Cd27P41272 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cd27P41272 Gm37194-201ENSMUST00000193092 3031 ntBASIC14.2□□□□□ -0.14
Cd27P41272 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cd27P41272 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cd27P41272 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Cd27P41272 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cd27P41272 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cd27P41272 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
Cd27P41272 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cd27P41272 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cd27P41272 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cd27P41272 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cd27P41272 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cd27P41272 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cd27P41272 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Cd27P41272 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cd27P41272 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Cd27P41272 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cd27P41272 Gm43183-201ENSMUST00000200632 547 ntBASIC14.19□□□□□ -0.14
Cd27P41272 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cd27P41272 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cd27P41272 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cd27P41272 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cd27P41272 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cd27P41272 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cd27P41272 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Cd27P41272 Fcho2-208ENSMUST00000224992 2964 ntBASIC14.18□□□□□ -0.14
Cd27P41272 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Cd27P41272 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC14.18□□□□□ -0.14
Cd27P41272 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cd27P41272 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cd27P41272 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC14.18□□□□□ -0.14
Cd27P41272 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC14.18□□□□□ -0.14
Cd27P41272 Gm22240-201ENSMUST00000175225 82 ntBASIC14.18□□□□□ -0.14
Cd27P41272 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cd27P41272 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cd27P41272 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cd27P41272 Gm37811-201ENSMUST00000192416 2601 ntBASIC14.18□□□□□ -0.14
Cd27P41272 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cd27P41272 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC14.18□□□□□ -0.14
Cd27P41272 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cd27P41272 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Cd27P41272 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cd27P41272 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Cd27P41272 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cd27P41272 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms