Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cd9P40240 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cd9P40240 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.52■□□□□ 0.4
Cd9P40240 Gm12527-201ENSMUST00000117967 564 ntBASIC17.52■□□□□ 0.4
Cd9P40240 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.52■□□□□ 0.4
Cd9P40240 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cd9P40240 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cd9P40240 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cd9P40240 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Cd9P40240 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cd9P40240 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.52■□□□□ 0.39
Cd9P40240 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cd9P40240 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cd9P40240 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cd9P40240 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.51■□□□□ 0.39
Cd9P40240 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cd9P40240 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Cd9P40240 Gm27275-201ENSMUST00000184318 272 ntBASIC17.51■□□□□ 0.39
Cd9P40240 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cd9P40240 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cd9P40240 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.51■□□□□ 0.39
Cd9P40240 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.51■□□□□ 0.39
Cd9P40240 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Cd9P40240 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
Cd9P40240 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cd9P40240 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cd9P40240 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cd9P40240 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Cd9P40240 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cd9P40240 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cd9P40240 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cd9P40240 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cd9P40240 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cd9P40240 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Cd9P40240 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.5■□□□□ 0.39
Cd9P40240 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.5■□□□□ 0.39
Cd9P40240 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cd9P40240 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.5■□□□□ 0.39
Cd9P40240 Gm18666-201ENSMUST00000190039 958 ntBASIC17.5■□□□□ 0.39
Cd9P40240 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.5■□□□□ 0.39
Cd9P40240 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cd9P40240 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cd9P40240 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.5■□□□□ 0.39
Cd9P40240 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.5■□□□□ 0.39
Cd9P40240 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cd9P40240 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cd9P40240 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Cd9P40240 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cd9P40240 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cd9P40240 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
Cd9P40240 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cd9P40240 Gm18025-201ENSMUST00000221733 862 ntBASIC17.49■□□□□ 0.39
Cd9P40240 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cd9P40240 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Cd9P40240 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cd9P40240 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cd9P40240 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cd9P40240 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
Cd9P40240 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cd9P40240 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Cd9P40240 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cd9P40240 Gm6576-201ENSMUST00000169678 883 ntBASIC17.48■□□□□ 0.39
Cd9P40240 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cd9P40240 Gm37856-201ENSMUST00000191634 999 ntBASIC17.48■□□□□ 0.39
Cd9P40240 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
Cd9P40240 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cd9P40240 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cd9P40240 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cd9P40240 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Cd9P40240 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cd9P40240 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.48■□□□□ 0.39
Cd9P40240 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cd9P40240 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cd9P40240 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Cd9P40240 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd9P40240 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Cd9P40240 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd9P40240 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd9P40240 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd9P40240 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Cd9P40240 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.47■□□□□ 0.39
Cd9P40240 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd9P40240 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cd9P40240 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cd9P40240 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cd9P40240 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd9P40240 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd9P40240 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.47■□□□□ 0.39
Cd9P40240 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd9P40240 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd9P40240 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd9P40240 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd9P40240 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd9P40240 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd9P40240 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd9P40240 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cd9P40240 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cd9P40240 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cd9P40240 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Cd9P40240 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms