Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Cxcl12P40224 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cxcl12P40224 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Cxcl12P40224 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cxcl12P40224 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Cxcl12P40224 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
Cxcl12P40224 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cxcl12P40224 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Cxcl12P40224 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cxcl12P40224 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Cxcl12P40224 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cxcl12P40224 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC18.33■□□□□ 0.52
Cxcl12P40224 Gm9731-201ENSMUST00000209480 747 ntBASIC18.33■□□□□ 0.52
Cxcl12P40224 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Cxcl12P40224 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cxcl12P40224 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cxcl12P40224 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Cxcl12P40224 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cxcl12P40224 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cxcl12P40224 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cxcl12P40224 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cxcl12P40224 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cxcl12P40224 Gm10418-201ENSMUST00000100943 576 ntBASIC18.32■□□□□ 0.52
Cxcl12P40224 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
Cxcl12P40224 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cxcl12P40224 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC18.32■□□□□ 0.52
Cxcl12P40224 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC18.32■□□□□ 0.52
Cxcl12P40224 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Cxcl12P40224 Gm45328-201ENSMUST00000210942 917 ntBASIC18.32■□□□□ 0.52
Cxcl12P40224 Il3ra-202ENSMUST00000223589 738 ntBASIC18.32■□□□□ 0.52
Cxcl12P40224 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC18.32■□□□□ 0.52
Cxcl12P40224 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Cxcl12P40224 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Cxcl12P40224 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cxcl12P40224 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Cxcl12P40224 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Cxcl12P40224 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cxcl12P40224 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Cxcl12P40224 Gm34391-201ENSMUST00000203706 907 ntBASIC18.31■□□□□ 0.52
Cxcl12P40224 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cxcl12P40224 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cxcl12P40224 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cxcl12P40224 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cxcl12P40224 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.31■□□□□ 0.52
Cxcl12P40224 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cxcl12P40224 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Cxcl12P40224 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cxcl12P40224 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cxcl12P40224 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
Cxcl12P40224 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cxcl12P40224 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cxcl12P40224 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cxcl12P40224 Gm37025-201ENSMUST00000195159 829 ntBASIC18.3■□□□□ 0.52
Cxcl12P40224 Gm5864-201ENSMUST00000202263 970 ntBASIC18.3■□□□□ 0.52
Cxcl12P40224 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.3■□□□□ 0.52
Cxcl12P40224 Birc2-201ENSMUST00000054878 378 ntBASIC18.3■□□□□ 0.52
Cxcl12P40224 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cxcl12P40224 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cxcl12P40224 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cxcl12P40224 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cxcl12P40224 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.3■□□□□ 0.52
Cxcl12P40224 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cxcl12P40224 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Cxcl12P40224 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Cxcl12P40224 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cxcl12P40224 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.29■□□□□ 0.52
Cxcl12P40224 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cxcl12P40224 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
Cxcl12P40224 Gm13401-201ENSMUST00000117074 291 ntBASIC18.29■□□□□ 0.52
Cxcl12P40224 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cxcl12P40224 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cxcl12P40224 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.29■□□□□ 0.52
Cxcl12P40224 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cxcl12P40224 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cxcl12P40224 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Cxcl12P40224 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cxcl12P40224 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Cxcl12P40224 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cxcl12P40224 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cxcl12P40224 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cxcl12P40224 Mir770-201ENSMUST00000103252 94 ntBASIC18.28■□□□□ 0.52
Cxcl12P40224 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC18.28■□□□□ 0.52
Cxcl12P40224 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cxcl12P40224 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
Cxcl12P40224 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cxcl12P40224 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cxcl12P40224 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cxcl12P40224 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Cxcl12P40224 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Cxcl12P40224 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cxcl12P40224 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cxcl12P40224 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
Cxcl12P40224 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.27■□□□□ 0.52
Cxcl12P40224 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cxcl12P40224 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cxcl12P40224 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC18.27■□□□□ 0.52
Cxcl12P40224 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cxcl12P40224 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cxcl12P40224 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cxcl12P40224 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 163.4 ms