Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rfc1P35601 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rfc1P35601 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rfc1P35601 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rfc1P35601 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rfc1P35601 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rfc1P35601 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rfc1P35601 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Rfc1P35601 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rfc1P35601 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.71■□□□□ 0.59
Rfc1P35601 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Rfc1P35601 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rfc1P35601 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Rfc1P35601 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rfc1P35601 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rfc1P35601 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rfc1P35601 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Rfc1P35601 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC18.71■□□□□ 0.58
Rfc1P35601 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rfc1P35601 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rfc1P35601 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rfc1P35601 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rfc1P35601 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Rfc1P35601 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rfc1P35601 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rfc1P35601 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rfc1P35601 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rfc1P35601 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rfc1P35601 Gm37812-201ENSMUST00000195216 2475 ntBASIC18.7■□□□□ 0.58
Rfc1P35601 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rfc1P35601 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rfc1P35601 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rfc1P35601 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rfc1P35601 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
Rfc1P35601 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rfc1P35601 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
Rfc1P35601 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rfc1P35601 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rfc1P35601 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rfc1P35601 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rfc1P35601 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rfc1P35601 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rfc1P35601 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.69■□□□□ 0.58
Rfc1P35601 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.69■□□□□ 0.58
Rfc1P35601 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rfc1P35601 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.69■□□□□ 0.58
Rfc1P35601 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Rfc1P35601 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rfc1P35601 Gm43017-201ENSMUST00000198296 752 ntBASIC18.69■□□□□ 0.58
Rfc1P35601 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Rfc1P35601 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rfc1P35601 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Rfc1P35601 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.69■□□□□ 0.58
Rfc1P35601 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rfc1P35601 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Rfc1P35601 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rfc1P35601 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Rfc1P35601 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC18.68■□□□□ 0.58
Rfc1P35601 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rfc1P35601 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rfc1P35601 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Rfc1P35601 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Rfc1P35601 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rfc1P35601 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rfc1P35601 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rfc1P35601 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rfc1P35601 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rfc1P35601 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rfc1P35601 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rfc1P35601 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rfc1P35601 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Rfc1P35601 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rfc1P35601 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Rfc1P35601 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rfc1P35601 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rfc1P35601 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rfc1P35601 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.67■□□□□ 0.58
Rfc1P35601 Gm26833-201ENSMUST00000180899 440 ntBASIC18.67■□□□□ 0.58
Rfc1P35601 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rfc1P35601 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Rfc1P35601 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Rfc1P35601 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rfc1P35601 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rfc1P35601 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Rfc1P35601 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.66■□□□□ 0.58
Rfc1P35601 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rfc1P35601 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC18.66■□□□□ 0.58
Rfc1P35601 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rfc1P35601 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rfc1P35601 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rfc1P35601 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rfc1P35601 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rfc1P35601 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Rfc1P35601 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rfc1P35601 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
Rfc1P35601 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rfc1P35601 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rfc1P35601 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.65■□□□□ 0.58
Rfc1P35601 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC18.65■□□□□ 0.58
Rfc1P35601 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms