Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rom1P32958 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rom1P32958 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rom1P32958 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rom1P32958 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rom1P32958 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rom1P32958 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Rom1P32958 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rom1P32958 AC160393.1-201ENSMUST00000218378 1279 ntBASIC14.09□□□□□ -0.15
Rom1P32958 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Rom1P32958 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rom1P32958 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rom1P32958 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rom1P32958 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC14.09□□□□□ -0.15
Rom1P32958 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rom1P32958 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC14.09□□□□□ -0.15
Rom1P32958 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Rom1P32958 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Rom1P32958 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Rom1P32958 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Rom1P32958 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rom1P32958 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Rom1P32958 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rom1P32958 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rom1P32958 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rom1P32958 Gm12251-201ENSMUST00000117893 792 ntBASIC14.08□□□□□ -0.16
Rom1P32958 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rom1P32958 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC14.08□□□□□ -0.16
Rom1P32958 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rom1P32958 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rom1P32958 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rom1P32958 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rom1P32958 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rom1P32958 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Rom1P32958 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Rom1P32958 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rom1P32958 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rom1P32958 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rom1P32958 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC14.08□□□□□ -0.16
Rom1P32958 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rom1P32958 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rom1P32958 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rom1P32958 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC14.07□□□□□ -0.16
Rom1P32958 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rom1P32958 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rom1P32958 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rom1P32958 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rom1P32958 Gm37563-201ENSMUST00000192580 1513 ntBASIC14.07□□□□□ -0.16
Rom1P32958 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rom1P32958 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Rom1P32958 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rom1P32958 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rom1P32958 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rom1P32958 Gm26971-201ENSMUST00000182423 1072 ntBASIC14.07□□□□□ -0.16
Rom1P32958 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC14.07□□□□□ -0.16
Rom1P32958 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Rom1P32958 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rom1P32958 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rom1P32958 Gm37519-201ENSMUST00000191687 2210 ntBASIC14.07□□□□□ -0.16
Rom1P32958 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rom1P32958 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rom1P32958 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rom1P32958 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rom1P32958 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rom1P32958 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rom1P32958 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rom1P32958 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rom1P32958 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rom1P32958 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rom1P32958 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rom1P32958 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Rom1P32958 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rom1P32958 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rom1P32958 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rom1P32958 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Rom1P32958 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Rom1P32958 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC14.06□□□□□ -0.16
Rom1P32958 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rom1P32958 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rom1P32958 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Rom1P32958 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rom1P32958 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rom1P32958 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rom1P32958 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
Rom1P32958 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Rom1P32958 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rom1P32958 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rom1P32958 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rom1P32958 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rom1P32958 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rom1P32958 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rom1P32958 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rom1P32958 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rom1P32958 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rom1P32958 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rom1P32958 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rom1P32958 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rom1P32958 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rom1P32958 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rom1P32958 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms