Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc6a1P31648 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Slc6a1P31648 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc6a1P31648 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc6a1P31648 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc6a1P31648 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC15.28■□□□□ 0.04
Slc6a1P31648 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC15.28■□□□□ 0.04
Slc6a1P31648 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC15.28■□□□□ 0.04
Slc6a1P31648 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC15.28■□□□□ 0.04
Slc6a1P31648 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc6a1P31648 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc6a1P31648 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC15.28■□□□□ 0.04
Slc6a1P31648 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc6a1P31648 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Slc6a1P31648 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc6a1P31648 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc6a1P31648 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc6a1P31648 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Slc6a1P31648 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Slc6a1P31648 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC15.27■□□□□ 0.04
Slc6a1P31648 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Slc6a1P31648 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Slc6a1P31648 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Slc6a1P31648 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
Slc6a1P31648 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Slc6a1P31648 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Slc6a1P31648 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Slc6a1P31648 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC15.27■□□□□ 0.04
Slc6a1P31648 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC15.27■□□□□ 0.04
Slc6a1P31648 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC15.27■□□□□ 0.04
Slc6a1P31648 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Slc6a1P31648 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Slc6a1P31648 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Slc6a1P31648 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Slc6a1P31648 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Slc6a1P31648 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
Slc6a1P31648 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Slc6a1P31648 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Slc6a1P31648 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Slc6a1P31648 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Slc6a1P31648 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Slc6a1P31648 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Slc6a1P31648 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Slc6a1P31648 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC15.26■□□□□ 0.03
Slc6a1P31648 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Slc6a1P31648 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC15.26■□□□□ 0.03
Slc6a1P31648 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Slc6a1P31648 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Slc6a1P31648 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Slc6a1P31648 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Slc6a1P31648 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Slc6a1P31648 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC15.26■□□□□ 0.03
Slc6a1P31648 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Slc6a1P31648 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Slc6a1P31648 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Slc6a1P31648 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Slc6a1P31648 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Slc6a1P31648 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Slc6a1P31648 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
Slc6a1P31648 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Slc6a1P31648 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Slc6a1P31648 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Slc6a1P31648 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC15.25■□□□□ 0.03
Slc6a1P31648 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Slc6a1P31648 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Slc6a1P31648 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC15.25■□□□□ 0.03
Slc6a1P31648 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC15.25■□□□□ 0.03
Slc6a1P31648 Gm5874-201ENSMUST00000096101 508 ntBASIC15.25■□□□□ 0.03
Slc6a1P31648 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Slc6a1P31648 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Slc6a1P31648 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Slc6a1P31648 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Slc6a1P31648 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Slc6a1P31648 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Slc6a1P31648 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Slc6a1P31648 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC15.25■□□□□ 0.03
Slc6a1P31648 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Slc6a1P31648 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Slc6a1P31648 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Slc6a1P31648 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a1P31648 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a1P31648 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a1P31648 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC15.24■□□□□ 0.03
Slc6a1P31648 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a1P31648 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a1P31648 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a1P31648 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a1P31648 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Slc6a1P31648 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a1P31648 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a1P31648 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Slc6a1P31648 Gm10493-201ENSMUST00000097270 612 ntBASIC15.24■□□□□ 0.03
Slc6a1P31648 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a1P31648 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a1P31648 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a1P31648 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Slc6a1P31648 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a1P31648 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a1P31648 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a1P31648 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms