Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nedd8P29595 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nedd8P29595 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Nedd8P29595 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Nedd8P29595 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nedd8P29595 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nedd8P29595 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nedd8P29595 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.48■□□□□ 0.23
Nedd8P29595 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nedd8P29595 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.48■□□□□ 0.23
Nedd8P29595 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nedd8P29595 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC16.48■□□□□ 0.23
Nedd8P29595 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC16.48■□□□□ 0.23
Nedd8P29595 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Nedd8P29595 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC16.48■□□□□ 0.23
Nedd8P29595 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC16.48■□□□□ 0.23
Nedd8P29595 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC16.48■□□□□ 0.23
Nedd8P29595 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Nedd8P29595 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nedd8P29595 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nedd8P29595 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nedd8P29595 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nedd8P29595 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Nedd8P29595 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nedd8P29595 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Nedd8P29595 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nedd8P29595 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.48■□□□□ 0.23
Nedd8P29595 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.47■□□□□ 0.23
Nedd8P29595 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nedd8P29595 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Nedd8P29595 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nedd8P29595 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nedd8P29595 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC16.47■□□□□ 0.23
Nedd8P29595 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.47■□□□□ 0.23
Nedd8P29595 Gm5921-201ENSMUST00000075898 882 ntBASIC16.47■□□□□ 0.23
Nedd8P29595 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC16.47■□□□□ 0.23
Nedd8P29595 Gm10209-201ENSMUST00000203397 1607 ntBASIC16.47■□□□□ 0.23
Nedd8P29595 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Nedd8P29595 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nedd8P29595 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Nedd8P29595 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nedd8P29595 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nedd8P29595 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nedd8P29595 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nedd8P29595 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nedd8P29595 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.46■□□□□ 0.23
Nedd8P29595 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nedd8P29595 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Nedd8P29595 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nedd8P29595 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.46■□□□□ 0.23
Nedd8P29595 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nedd8P29595 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nedd8P29595 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nedd8P29595 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.46■□□□□ 0.23
Nedd8P29595 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nedd8P29595 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Nedd8P29595 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Nedd8P29595 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nedd8P29595 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Nedd8P29595 Mir6538-201ENSMUST00000183713 110 ntBASIC16.46■□□□□ 0.23
Nedd8P29595 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nedd8P29595 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nedd8P29595 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Nedd8P29595 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nedd8P29595 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Nedd8P29595 Dancr-204ENSMUST00000132389 2347 ntBASIC16.46■□□□□ 0.23
Nedd8P29595 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nedd8P29595 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Nedd8P29595 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Nedd8P29595 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Nedd8P29595 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC16.45■□□□□ 0.22
Nedd8P29595 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC16.45■□□□□ 0.22
Nedd8P29595 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Nedd8P29595 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nedd8P29595 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nedd8P29595 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nedd8P29595 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nedd8P29595 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nedd8P29595 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Nedd8P29595 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nedd8P29595 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nedd8P29595 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.44■□□□□ 0.22
Nedd8P29595 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nedd8P29595 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nedd8P29595 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.44■□□□□ 0.22
Nedd8P29595 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nedd8P29595 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nedd8P29595 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Nedd8P29595 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nedd8P29595 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nedd8P29595 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Nedd8P29595 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Nedd8P29595 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nedd8P29595 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nedd8P29595 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nedd8P29595 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Nedd8P29595 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nedd8P29595 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nedd8P29595 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nedd8P29595 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms