Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Vcam1P29533 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vcam1P29533 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vcam1P29533 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Vcam1P29533 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Vcam1P29533 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vcam1P29533 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Vcam1P29533 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Vcam1P29533 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC20.51■□□□□ 0.87
Vcam1P29533 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC20.51■□□□□ 0.87
Vcam1P29533 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Vcam1P29533 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vcam1P29533 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vcam1P29533 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vcam1P29533 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC20.51■□□□□ 0.87
Vcam1P29533 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Vcam1P29533 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vcam1P29533 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vcam1P29533 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Vcam1P29533 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vcam1P29533 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vcam1P29533 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Vcam1P29533 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vcam1P29533 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC20.5■□□□□ 0.87
Vcam1P29533 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vcam1P29533 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vcam1P29533 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vcam1P29533 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vcam1P29533 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vcam1P29533 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Vcam1P29533 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vcam1P29533 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC20.49■□□□□ 0.87
Vcam1P29533 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Vcam1P29533 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Vcam1P29533 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vcam1P29533 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC20.49■□□□□ 0.87
Vcam1P29533 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vcam1P29533 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vcam1P29533 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vcam1P29533 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vcam1P29533 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vcam1P29533 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vcam1P29533 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Vcam1P29533 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Vcam1P29533 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Vcam1P29533 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Vcam1P29533 Gm10013-201ENSMUST00000106074 672 ntBASIC20.48■□□□□ 0.87
Vcam1P29533 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Vcam1P29533 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Vcam1P29533 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
Vcam1P29533 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Vcam1P29533 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Vcam1P29533 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Vcam1P29533 Gm23634-201ENSMUST00000175071 91 ntBASIC20.48■□□□□ 0.87
Vcam1P29533 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Vcam1P29533 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Vcam1P29533 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Vcam1P29533 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Vcam1P29533 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Vcam1P29533 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Vcam1P29533 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.48■□□□□ 0.87
Vcam1P29533 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Vcam1P29533 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Vcam1P29533 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Vcam1P29533 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Vcam1P29533 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Vcam1P29533 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Vcam1P29533 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC20.47■□□□□ 0.87
Vcam1P29533 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Vcam1P29533 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC20.47■□□□□ 0.87
Vcam1P29533 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Vcam1P29533 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Vcam1P29533 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Vcam1P29533 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Vcam1P29533 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Vcam1P29533 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Vcam1P29533 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC20.47■□□□□ 0.87
Vcam1P29533 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vcam1P29533 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC20.46■□□□□ 0.87
Vcam1P29533 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vcam1P29533 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vcam1P29533 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vcam1P29533 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Vcam1P29533 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Vcam1P29533 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC20.46■□□□□ 0.87
Vcam1P29533 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Vcam1P29533 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC20.46■□□□□ 0.87
Vcam1P29533 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC20.46■□□□□ 0.87
Vcam1P29533 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC20.46■□□□□ 0.87
Vcam1P29533 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Vcam1P29533 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Vcam1P29533 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vcam1P29533 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vcam1P29533 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Vcam1P29533 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vcam1P29533 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Vcam1P29533 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
Vcam1P29533 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Vcam1P29533 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Vcam1P29533 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms