Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.09■□□□□ 0.17
Cd40P27512 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cd40P27512 Gm5643-201ENSMUST00000117081 966 ntBASIC16.09■□□□□ 0.17
Cd40P27512 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cd40P27512 H2-K2-201ENSMUST00000174250 1049 ntBASIC16.09■□□□□ 0.17
Cd40P27512 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC16.09■□□□□ 0.17
Cd40P27512 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cd40P27512 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cd40P27512 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cd40P27512 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cd40P27512 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cd40P27512 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cd40P27512 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cd40P27512 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.08■□□□□ 0.17
Cd40P27512 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
Cd40P27512 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cd40P27512 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Cd40P27512 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cd40P27512 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cd40P27512 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Cd40P27512 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cd40P27512 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cd40P27512 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cd40P27512 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC16.08■□□□□ 0.16
Cd40P27512 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Cd40P27512 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.08■□□□□ 0.16
Cd40P27512 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cd40P27512 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cd40P27512 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cd40P27512 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cd40P27512 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
Cd40P27512 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cd40P27512 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cd40P27512 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Cd40P27512 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cd40P27512 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cd40P27512 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cd40P27512 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cd40P27512 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cd40P27512 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.07■□□□□ 0.16
Cd40P27512 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cd40P27512 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC16.07■□□□□ 0.16
Cd40P27512 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC16.07■□□□□ 0.16
Cd40P27512 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cd40P27512 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC16.07■□□□□ 0.16
Cd40P27512 Gm8969-201ENSMUST00000199694 526 ntBASIC16.07■□□□□ 0.16
Cd40P27512 Gm18025-201ENSMUST00000221733 862 ntBASIC16.07■□□□□ 0.16
Cd40P27512 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cd40P27512 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cd40P27512 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC16.07■□□□□ 0.16
Cd40P27512 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cd40P27512 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cd40P27512 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cd40P27512 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.06■□□□□ 0.16
Cd40P27512 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cd40P27512 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Cd40P27512 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cd40P27512 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cd40P27512 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cd40P27512 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cd40P27512 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC16.06■□□□□ 0.16
Cd40P27512 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.06■□□□□ 0.16
Cd40P27512 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC16.06■□□□□ 0.16
Cd40P27512 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cd40P27512 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cd40P27512 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16.06■□□□□ 0.16
Cd40P27512 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
Cd40P27512 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cd40P27512 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cd40P27512 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.06■□□□□ 0.16
Cd40P27512 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cd40P27512 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cd40P27512 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cd40P27512 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cd40P27512 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cd40P27512 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cd40P27512 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cd40P27512 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cd40P27512 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cd40P27512 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Cd40P27512 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Cd40P27512 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cd40P27512 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cd40P27512 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cd40P27512 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cd40P27512 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC16.05■□□□□ 0.16
Cd40P27512 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC16.05■□□□□ 0.16
Cd40P27512 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cd40P27512 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cd40P27512 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cd40P27512 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cd40P27512 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cd40P27512 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Cd40P27512 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cd40P27512 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cd40P27512 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cd40P27512 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cd40P27512 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC16.04■□□□□ 0.16
Cd40P27512 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Cd40P27512 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms