Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Col8a2P25318 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col8a2P25318 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC14.83□□□□□ -0.04
Col8a2P25318 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col8a2P25318 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC14.83□□□□□ -0.04
Col8a2P25318 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col8a2P25318 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col8a2P25318 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col8a2P25318 Gm37194-201ENSMUST00000193092 3031 ntBASIC14.83□□□□□ -0.04
Col8a2P25318 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col8a2P25318 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col8a2P25318 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Col8a2P25318 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col8a2P25318 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
Col8a2P25318 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col8a2P25318 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col8a2P25318 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC14.82□□□□□ -0.04
Col8a2P25318 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col8a2P25318 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col8a2P25318 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Col8a2P25318 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Col8a2P25318 Gm12382-201ENSMUST00000122005 922 ntBASIC14.82□□□□□ -0.04
Col8a2P25318 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC14.82□□□□□ -0.04
Col8a2P25318 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC14.82□□□□□ -0.04
Col8a2P25318 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col8a2P25318 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Col8a2P25318 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col8a2P25318 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col8a2P25318 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col8a2P25318 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Col8a2P25318 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col8a2P25318 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col8a2P25318 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Col8a2P25318 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col8a2P25318 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col8a2P25318 Gm7712-202ENSMUST00000222331 1510 ntBASIC14.82□□□□□ -0.04
Col8a2P25318 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col8a2P25318 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col8a2P25318 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
Col8a2P25318 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col8a2P25318 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col8a2P25318 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col8a2P25318 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col8a2P25318 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col8a2P25318 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col8a2P25318 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Col8a2P25318 Gm13401-201ENSMUST00000117074 291 ntBASIC14.81□□□□□ -0.04
Col8a2P25318 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col8a2P25318 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col8a2P25318 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Col8a2P25318 Krtap5-1-202ENSMUST00000188274 742 ntBASIC14.81□□□□□ -0.04
Col8a2P25318 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC14.81□□□□□ -0.04
Col8a2P25318 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC14.81□□□□□ -0.04
Col8a2P25318 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col8a2P25318 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Col8a2P25318 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC14.81□□□□□ -0.04
Col8a2P25318 Gm5417-201ENSMUST00000079706 384 ntBASIC14.81□□□□□ -0.04
Col8a2P25318 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Col8a2P25318 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col8a2P25318 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col8a2P25318 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col8a2P25318 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Col8a2P25318 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col8a2P25318 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Col8a2P25318 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Col8a2P25318 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Col8a2P25318 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Col8a2P25318 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Col8a2P25318 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC14.8□□□□□ -0.04
Col8a2P25318 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col8a2P25318 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col8a2P25318 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col8a2P25318 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col8a2P25318 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col8a2P25318 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col8a2P25318 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Col8a2P25318 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Col8a2P25318 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col8a2P25318 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Col8a2P25318 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Col8a2P25318 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col8a2P25318 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col8a2P25318 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col8a2P25318 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Col8a2P25318 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col8a2P25318 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col8a2P25318 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col8a2P25318 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col8a2P25318 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC14.8□□□□□ -0.04
Col8a2P25318 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col8a2P25318 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Col8a2P25318 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Col8a2P25318 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col8a2P25318 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col8a2P25318 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Col8a2P25318 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC14.79□□□□□ -0.04
Col8a2P25318 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col8a2P25318 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Col8a2P25318 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC14.79□□□□□ -0.04
Col8a2P25318 Gm12085-201ENSMUST00000119263 940 ntBASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms