Protein–RNA interactions for Protein: P24549

Aldh1a1, Retinal dehydrogenase 1, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aldh1a1P24549 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Aldh1a1P24549 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Aldh1a1P24549 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC19.07■□□□□ 0.64
Aldh1a1P24549 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC19.07■□□□□ 0.64
Aldh1a1P24549 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Aldh1a1P24549 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Aldh1a1P24549 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Aldh1a1P24549 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Aldh1a1P24549 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Aldh1a1P24549 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Aldh1a1P24549 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.07■□□□□ 0.64
Aldh1a1P24549 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Aldh1a1P24549 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.06■□□□□ 0.64
Aldh1a1P24549 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Aldh1a1P24549 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Aldh1a1P24549 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Aldh1a1P24549 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Aldh1a1P24549 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
Aldh1a1P24549 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Aldh1a1P24549 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Aldh1a1P24549 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Aldh1a1P24549 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Aldh1a1P24549 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Aldh1a1P24549 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Aldh1a1P24549 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Aldh1a1P24549 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Aldh1a1P24549 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Aldh1a1P24549 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Aldh1a1P24549 Gm11355-201ENSMUST00000121120 306 ntBASIC19.05■□□□□ 0.64
Aldh1a1P24549 Gm17808-201ENSMUST00000200859 894 ntBASIC19.05■□□□□ 0.64
Aldh1a1P24549 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Aldh1a1P24549 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Aldh1a1P24549 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
Aldh1a1P24549 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Aldh1a1P24549 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Aldh1a1P24549 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
Aldh1a1P24549 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
Aldh1a1P24549 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Aldh1a1P24549 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Aldh1a1P24549 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Aldh1a1P24549 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC19.04■□□□□ 0.64
Aldh1a1P24549 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Aldh1a1P24549 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Aldh1a1P24549 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Aldh1a1P24549 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Aldh1a1P24549 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC19.04■□□□□ 0.64
Aldh1a1P24549 Umpk-ps-201ENSMUST00000211897 827 ntBASIC19.04■□□□□ 0.64
Aldh1a1P24549 Gm7213-201ENSMUST00000215977 950 ntBASIC19.04■□□□□ 0.64
Aldh1a1P24549 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Aldh1a1P24549 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Aldh1a1P24549 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Aldh1a1P24549 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Aldh1a1P24549 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Aldh1a1P24549 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Aldh1a1P24549 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Aldh1a1P24549 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Aldh1a1P24549 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Aldh1a1P24549 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Aldh1a1P24549 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC19.03■□□□□ 0.64
Aldh1a1P24549 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Aldh1a1P24549 Gm18958-201ENSMUST00000174258 762 ntBASIC19.03■□□□□ 0.64
Aldh1a1P24549 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Aldh1a1P24549 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Aldh1a1P24549 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.02■□□□□ 0.64
Aldh1a1P24549 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Aldh1a1P24549 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Aldh1a1P24549 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
Aldh1a1P24549 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Aldh1a1P24549 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Aldh1a1P24549 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Aldh1a1P24549 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Aldh1a1P24549 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Aldh1a1P24549 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Aldh1a1P24549 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Aldh1a1P24549 Il3ra-202ENSMUST00000223589 738 ntBASIC19.02■□□□□ 0.64
Aldh1a1P24549 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Aldh1a1P24549 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Aldh1a1P24549 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Aldh1a1P24549 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Aldh1a1P24549 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Aldh1a1P24549 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Aldh1a1P24549 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Aldh1a1P24549 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC19.01■□□□□ 0.63
Aldh1a1P24549 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Aldh1a1P24549 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Aldh1a1P24549 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Aldh1a1P24549 Gm37025-201ENSMUST00000195159 829 ntBASIC19.01■□□□□ 0.63
Aldh1a1P24549 Gm9731-201ENSMUST00000209480 747 ntBASIC19.01■□□□□ 0.63
Aldh1a1P24549 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Aldh1a1P24549 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Aldh1a1P24549 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Aldh1a1P24549 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Aldh1a1P24549 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Aldh1a1P24549 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Aldh1a1P24549 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Aldh1a1P24549 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
Aldh1a1P24549 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19■□□□□ 0.63
Aldh1a1P24549 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
Aldh1a1P24549 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC19■□□□□ 0.63
Aldh1a1P24549 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms