Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgn1P18608 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmgn1P18608 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Hmgn1P18608 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Hmgn1P18608 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Hmgn1P18608 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmgn1P18608 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmgn1P18608 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmgn1P18608 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmgn1P18608 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.3■□□□□ 0.2
Hmgn1P18608 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmgn1P18608 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmgn1P18608 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmgn1P18608 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Hmgn1P18608 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmgn1P18608 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Hmgn1P18608 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hmgn1P18608 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Hmgn1P18608 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
Hmgn1P18608 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hmgn1P18608 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hmgn1P18608 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hmgn1P18608 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hmgn1P18608 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC16.29■□□□□ 0.2
Hmgn1P18608 Gm45417-201ENSMUST00000209533 758 ntBASIC16.29■□□□□ 0.2
Hmgn1P18608 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC16.29■□□□□ 0.2
Hmgn1P18608 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hmgn1P18608 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hmgn1P18608 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hmgn1P18608 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Hmgn1P18608 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hmgn1P18608 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Hmgn1P18608 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hmgn1P18608 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Hmgn1P18608 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hmgn1P18608 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hmgn1P18608 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hmgn1P18608 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Hmgn1P18608 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC16.28■□□□□ 0.2
Hmgn1P18608 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hmgn1P18608 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC16.28■□□□□ 0.2
Hmgn1P18608 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC16.28■□□□□ 0.2
Hmgn1P18608 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC16.28■□□□□ 0.2
Hmgn1P18608 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hmgn1P18608 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Hmgn1P18608 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hmgn1P18608 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hmgn1P18608 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hmgn1P18608 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Hmgn1P18608 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Hmgn1P18608 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hmgn1P18608 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hmgn1P18608 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hmgn1P18608 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hmgn1P18608 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Hmgn1P18608 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Hmgn1P18608 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC16.27■□□□□ 0.2
Hmgn1P18608 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Hmgn1P18608 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Hmgn1P18608 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Hmgn1P18608 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.27■□□□□ 0.19
Hmgn1P18608 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Hmgn1P18608 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Hmgn1P18608 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Hmgn1P18608 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.26■□□□□ 0.19
Hmgn1P18608 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.26■□□□□ 0.19
Hmgn1P18608 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.26■□□□□ 0.19
Hmgn1P18608 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmgn1P18608 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmgn1P18608 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Hmgn1P18608 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmgn1P18608 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmgn1P18608 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmgn1P18608 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmgn1P18608 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmgn1P18608 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmgn1P18608 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC16.26■□□□□ 0.19
Hmgn1P18608 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC16.26■□□□□ 0.19
Hmgn1P18608 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.26■□□□□ 0.19
Hmgn1P18608 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmgn1P18608 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmgn1P18608 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmgn1P18608 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmgn1P18608 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmgn1P18608 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmgn1P18608 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hmgn1P18608 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.25■□□□□ 0.19
Hmgn1P18608 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Hmgn1P18608 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hmgn1P18608 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hmgn1P18608 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hmgn1P18608 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hmgn1P18608 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hmgn1P18608 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hmgn1P18608 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hmgn1P18608 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC16.25■□□□□ 0.19
Hmgn1P18608 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Hmgn1P18608 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC16.25■□□□□ 0.19
Hmgn1P18608 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hmgn1P18608 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms