Protein–RNA interactions for Protein: P17125

Tgfb3, Transforming growth factor beta-3, mousemouse

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfb3P17125 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tgfb3P17125 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tgfb3P17125 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tgfb3P17125 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
Tgfb3P17125 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tgfb3P17125 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.34■□□□□ 0.37
Tgfb3P17125 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Tgfb3P17125 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tgfb3P17125 Gm43183-201ENSMUST00000200632 547 ntBASIC17.34■□□□□ 0.37
Tgfb3P17125 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.34■□□□□ 0.37
Tgfb3P17125 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Tgfb3P17125 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tgfb3P17125 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tgfb3P17125 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tgfb3P17125 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Tgfb3P17125 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
Tgfb3P17125 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Tgfb3P17125 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tgfb3P17125 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tgfb3P17125 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Tgfb3P17125 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Tgfb3P17125 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.37
Tgfb3P17125 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tgfb3P17125 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Tgfb3P17125 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tgfb3P17125 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.33■□□□□ 0.37
Tgfb3P17125 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.33■□□□□ 0.37
Tgfb3P17125 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Tgfb3P17125 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Tgfb3P17125 Gm6576-201ENSMUST00000169678 883 ntBASIC17.33■□□□□ 0.36
Tgfb3P17125 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Tgfb3P17125 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tgfb3P17125 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tgfb3P17125 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Tgfb3P17125 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tgfb3P17125 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tgfb3P17125 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tgfb3P17125 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Tgfb3P17125 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Tgfb3P17125 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.32■□□□□ 0.36
Tgfb3P17125 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
Tgfb3P17125 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.32■□□□□ 0.36
Tgfb3P17125 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tgfb3P17125 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tgfb3P17125 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.32■□□□□ 0.36
Tgfb3P17125 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tgfb3P17125 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.32■□□□□ 0.36
Tgfb3P17125 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.32■□□□□ 0.36
Tgfb3P17125 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.32■□□□□ 0.36
Tgfb3P17125 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tgfb3P17125 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tgfb3P17125 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tgfb3P17125 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tgfb3P17125 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tgfb3P17125 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.31■□□□□ 0.36
Tgfb3P17125 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tgfb3P17125 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tgfb3P17125 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.31■□□□□ 0.36
Tgfb3P17125 Gm37292-201ENSMUST00000192062 758 ntBASIC17.31■□□□□ 0.36
Tgfb3P17125 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Tgfb3P17125 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Tgfb3P17125 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Tgfb3P17125 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tgfb3P17125 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tgfb3P17125 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tgfb3P17125 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tgfb3P17125 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Tgfb3P17125 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Tgfb3P17125 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.31■□□□□ 0.36
Tgfb3P17125 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Tgfb3P17125 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.3■□□□□ 0.36
Tgfb3P17125 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Tgfb3P17125 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.3■□□□□ 0.36
Tgfb3P17125 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tgfb3P17125 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tgfb3P17125 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tgfb3P17125 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Tgfb3P17125 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tgfb3P17125 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tgfb3P17125 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
Tgfb3P17125 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tgfb3P17125 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
Tgfb3P17125 Mir1199-201ENSMUST00000117015 119 ntBASIC17.3■□□□□ 0.36
Tgfb3P17125 Gm12382-201ENSMUST00000122005 922 ntBASIC17.3■□□□□ 0.36
Tgfb3P17125 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.3■□□□□ 0.36
Tgfb3P17125 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tgfb3P17125 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tgfb3P17125 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Tgfb3P17125 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tgfb3P17125 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tgfb3P17125 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tgfb3P17125 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tgfb3P17125 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tgfb3P17125 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tgfb3P17125 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tgfb3P17125 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tgfb3P17125 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tgfb3P17125 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Tgfb3P17125 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Tgfb3P17125 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms