Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccl1P10146 Gm43672-201ENSMUST00000199072 1731 ntBASIC13.83□□□□□ -0.2
Ccl1P10146 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccl1P10146 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccl1P10146 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccl1P10146 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ccl1P10146 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccl1P10146 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC13.83□□□□□ -0.2
Ccl1P10146 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccl1P10146 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ccl1P10146 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccl1P10146 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccl1P10146 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccl1P10146 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccl1P10146 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Ccl1P10146 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccl1P10146 Cxcl14-202ENSMUST00000224801 1467 ntBASIC13.82□□□□□ -0.2
Ccl1P10146 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC13.82□□□□□ -0.2
Ccl1P10146 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC13.82□□□□□ -0.2
Ccl1P10146 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccl1P10146 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccl1P10146 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccl1P10146 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC13.82□□□□□ -0.2
Ccl1P10146 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ccl1P10146 Gm37805-201ENSMUST00000192612 1094 ntBASIC13.82□□□□□ -0.2
Ccl1P10146 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Ccl1P10146 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccl1P10146 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ccl1P10146 Gm43808-201ENSMUST00000202534 2065 ntBASIC13.82□□□□□ -0.2
Ccl1P10146 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccl1P10146 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Ccl1P10146 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Ccl1P10146 Tgds-204ENSMUST00000228543 1594 ntBASIC13.82□□□□□ -0.2
Ccl1P10146 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccl1P10146 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccl1P10146 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Ccl1P10146 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ccl1P10146 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccl1P10146 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Ccl1P10146 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccl1P10146 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Ccl1P10146 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccl1P10146 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccl1P10146 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccl1P10146 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccl1P10146 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Ccl1P10146 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccl1P10146 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC13.81□□□□□ -0.2
Ccl1P10146 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccl1P10146 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccl1P10146 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccl1P10146 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccl1P10146 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Ccl1P10146 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccl1P10146 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccl1P10146 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC13.81□□□□□ -0.2
Ccl1P10146 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccl1P10146 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Ccl1P10146 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Ccl1P10146 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccl1P10146 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccl1P10146 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccl1P10146 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Ccl1P10146 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccl1P10146 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
Ccl1P10146 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccl1P10146 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Ccl1P10146 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Ccl1P10146 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC13.8□□□□□ -0.2
Ccl1P10146 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC13.8□□□□□ -0.2
Ccl1P10146 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccl1P10146 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccl1P10146 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccl1P10146 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
Ccl1P10146 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccl1P10146 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC13.8□□□□□ -0.2
Ccl1P10146 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccl1P10146 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccl1P10146 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccl1P10146 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccl1P10146 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccl1P10146 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Ccl1P10146 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccl1P10146 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccl1P10146 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccl1P10146 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccl1P10146 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccl1P10146 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccl1P10146 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC13.79□□□□□ -0.2
Ccl1P10146 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ccl1P10146 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccl1P10146 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccl1P10146 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccl1P10146 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccl1P10146 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccl1P10146 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccl1P10146 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccl1P10146 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccl1P10146 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccl1P10146 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms