Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Smim1P0C8K7 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Smim1P0C8K7 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smim1P0C8K7 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smim1P0C8K7 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smim1P0C8K7 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smim1P0C8K7 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Smim1P0C8K7 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smim1P0C8K7 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Smim1P0C8K7 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Smim1P0C8K7 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Smim1P0C8K7 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Smim1P0C8K7 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Smim1P0C8K7 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.44
Smim1P0C8K7 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Smim1P0C8K7 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Smim1P0C8K7 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Smim1P0C8K7 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Smim1P0C8K7 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Smim1P0C8K7 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smim1P0C8K7 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smim1P0C8K7 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smim1P0C8K7 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smim1P0C8K7 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC12.27□□□□□ -0.45
Smim1P0C8K7 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC12.27□□□□□ -0.45
Smim1P0C8K7 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Smim1P0C8K7 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smim1P0C8K7 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smim1P0C8K7 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smim1P0C8K7 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Smim1P0C8K7 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Smim1P0C8K7 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smim1P0C8K7 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smim1P0C8K7 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smim1P0C8K7 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Smim1P0C8K7 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smim1P0C8K7 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smim1P0C8K7 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smim1P0C8K7 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Smim1P0C8K7 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC12.26□□□□□ -0.45
Smim1P0C8K7 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smim1P0C8K7 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smim1P0C8K7 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Smim1P0C8K7 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC12.26□□□□□ -0.45
Smim1P0C8K7 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC12.26□□□□□ -0.45
Smim1P0C8K7 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC12.26□□□□□ -0.45
Smim1P0C8K7 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Smim1P0C8K7 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smim1P0C8K7 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smim1P0C8K7 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smim1P0C8K7 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC12.26□□□□□ -0.45
Smim1P0C8K7 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smim1P0C8K7 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC12.26□□□□□ -0.45
Smim1P0C8K7 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Smim1P0C8K7 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smim1P0C8K7 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smim1P0C8K7 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Smim1P0C8K7 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smim1P0C8K7 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smim1P0C8K7 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Smim1P0C8K7 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Smim1P0C8K7 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smim1P0C8K7 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smim1P0C8K7 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smim1P0C8K7 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smim1P0C8K7 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC12.25□□□□□ -0.45
Smim1P0C8K7 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smim1P0C8K7 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smim1P0C8K7 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smim1P0C8K7 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC12.25□□□□□ -0.45
Smim1P0C8K7 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC12.25□□□□□ -0.45
Smim1P0C8K7 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smim1P0C8K7 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smim1P0C8K7 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smim1P0C8K7 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smim1P0C8K7 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Smim1P0C8K7 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smim1P0C8K7 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Smim1P0C8K7 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Smim1P0C8K7 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smim1P0C8K7 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC12.25□□□□□ -0.45
Smim1P0C8K7 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smim1P0C8K7 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC12.24□□□□□ -0.45
Smim1P0C8K7 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smim1P0C8K7 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smim1P0C8K7 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Smim1P0C8K7 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC12.24□□□□□ -0.45
Smim1P0C8K7 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Smim1P0C8K7 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smim1P0C8K7 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Smim1P0C8K7 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smim1P0C8K7 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smim1P0C8K7 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smim1P0C8K7 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Smim1P0C8K7 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Smim1P0C8K7 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC12.24□□□□□ -0.45
Smim1P0C8K7 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smim1P0C8K7 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smim1P0C8K7 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Smim1P0C8K7 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms