Protein–RNA interactions for Protein: P09925

Surf1, Surfeit locus protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Surf1P09925 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Surf1P09925 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC20.06■□□□□ 0.8
Surf1P09925 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Surf1P09925 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Surf1P09925 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC20.06■□□□□ 0.8
Surf1P09925 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Surf1P09925 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Surf1P09925 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Surf1P09925 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Surf1P09925 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Surf1P09925 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Surf1P09925 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Surf1P09925 Dio3-201ENSMUST00000097228 1449 ntBASIC20.05■□□□□ 0.8
Surf1P09925 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Surf1P09925 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Surf1P09925 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC20.05■□□□□ 0.8
Surf1P09925 Trmt13-210ENSMUST00000198454 880 ntBASIC20.05■□□□□ 0.8
Surf1P09925 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Surf1P09925 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Surf1P09925 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC20.05■□□□□ 0.8
Surf1P09925 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Surf1P09925 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Surf1P09925 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Surf1P09925 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC20.04■□□□□ 0.8
Surf1P09925 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Surf1P09925 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC20.04■□□□□ 0.8
Surf1P09925 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Surf1P09925 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Surf1P09925 Gm15847-201ENSMUST00000121417 1065 ntBASIC20.04■□□□□ 0.8
Surf1P09925 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC20.04■□□□□ 0.8
Surf1P09925 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Surf1P09925 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Surf1P09925 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Surf1P09925 Gm7292-201ENSMUST00000194706 2527 ntBASIC20.04■□□□□ 0.8
Surf1P09925 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Surf1P09925 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Surf1P09925 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Surf1P09925 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC20.03■□□□□ 0.8
Surf1P09925 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Surf1P09925 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC20.03■□□□□ 0.8
Surf1P09925 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Surf1P09925 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC20.03■□□□□ 0.8
Surf1P09925 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC20.03■□□□□ 0.8
Surf1P09925 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Surf1P09925 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Surf1P09925 Flg-201ENSMUST00000050758 1488 ntBASIC20.03■□□□□ 0.8
Surf1P09925 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Surf1P09925 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Surf1P09925 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Surf1P09925 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Surf1P09925 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Surf1P09925 Gm38308-201ENSMUST00000194934 1809 ntBASIC20.02■□□□□ 0.8
Surf1P09925 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC20.02■□□□□ 0.8
Surf1P09925 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Surf1P09925 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Surf1P09925 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Surf1P09925 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Surf1P09925 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Surf1P09925 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Surf1P09925 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Surf1P09925 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Surf1P09925 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Surf1P09925 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Surf1P09925 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Surf1P09925 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Surf1P09925 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Surf1P09925 Gm43294-201ENSMUST00000202850 2490 ntBASIC20.01■□□□□ 0.79
Surf1P09925 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Surf1P09925 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Surf1P09925 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Surf1P09925 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Surf1P09925 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
Surf1P09925 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC20.01■□□□□ 0.79
Surf1P09925 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC20.01■□□□□ 0.79
Surf1P09925 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Surf1P09925 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Surf1P09925 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Surf1P09925 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Surf1P09925 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Surf1P09925 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Surf1P09925 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Surf1P09925 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
Surf1P09925 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Surf1P09925 Gm27275-201ENSMUST00000184318 272 ntBASIC20■□□□□ 0.79
Surf1P09925 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC20■□□□□ 0.79
Surf1P09925 Gm44878-201ENSMUST00000205812 1295 ntBASIC20■□□□□ 0.79
Surf1P09925 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC20■□□□□ 0.79
Surf1P09925 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC20■□□□□ 0.79
Surf1P09925 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Surf1P09925 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Surf1P09925 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Surf1P09925 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Surf1P09925 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC19.99■□□□□ 0.79
Surf1P09925 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Surf1P09925 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Surf1P09925 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Surf1P09925 Gm8520-201ENSMUST00000186517 868 ntBASIC19.99■□□□□ 0.79
Surf1P09925 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.99■□□□□ 0.79
Surf1P09925 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.99■□□□□ 0.79
Surf1P09925 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms