Protein–RNA interactions for Protein: P09055

Itgb1, Integrin beta-1, mousemouse

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb1P09055 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Itgb1P09055 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Itgb1P09055 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Itgb1P09055 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.6■□□□□ 0.57
Itgb1P09055 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC18.6■□□□□ 0.57
Itgb1P09055 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Itgb1P09055 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Itgb1P09055 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Itgb1P09055 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Itgb1P09055 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Itgb1P09055 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Itgb1P09055 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Itgb1P09055 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC18.59■□□□□ 0.57
Itgb1P09055 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Itgb1P09055 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Itgb1P09055 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Itgb1P09055 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Itgb1P09055 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Itgb1P09055 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Itgb1P09055 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Itgb1P09055 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Itgb1P09055 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Itgb1P09055 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Itgb1P09055 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Itgb1P09055 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Itgb1P09055 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.58■□□□□ 0.57
Itgb1P09055 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Itgb1P09055 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Itgb1P09055 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Itgb1P09055 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Itgb1P09055 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Itgb1P09055 Gm13401-201ENSMUST00000117074 291 ntBASIC18.58■□□□□ 0.56
Itgb1P09055 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC18.58■□□□□ 0.56
Itgb1P09055 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Itgb1P09055 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.58■□□□□ 0.56
Itgb1P09055 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Itgb1P09055 Tgds-204ENSMUST00000228543 1594 ntBASIC18.58■□□□□ 0.56
Itgb1P09055 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Itgb1P09055 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Itgb1P09055 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Itgb1P09055 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Itgb1P09055 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Itgb1P09055 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Itgb1P09055 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.57■□□□□ 0.56
Itgb1P09055 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Itgb1P09055 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Itgb1P09055 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
Itgb1P09055 Gm9103-201ENSMUST00000119371 405 ntBASIC18.57■□□□□ 0.56
Itgb1P09055 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Itgb1P09055 Mir5130-201ENSMUST00000175160 84 ntBASIC18.57■□□□□ 0.56
Itgb1P09055 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC18.57■□□□□ 0.56
Itgb1P09055 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Itgb1P09055 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Itgb1P09055 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.57■□□□□ 0.56
Itgb1P09055 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Itgb1P09055 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Itgb1P09055 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Itgb1P09055 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Itgb1P09055 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Itgb1P09055 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Itgb1P09055 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Itgb1P09055 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.56■□□□□ 0.56
Itgb1P09055 Ank2-226ENSMUST00000189368 339 ntBASIC18.56■□□□□ 0.56
Itgb1P09055 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC18.56■□□□□ 0.56
Itgb1P09055 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Itgb1P09055 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Itgb1P09055 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.56■□□□□ 0.56
Itgb1P09055 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Itgb1P09055 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Itgb1P09055 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Itgb1P09055 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.56■□□□□ 0.56
Itgb1P09055 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Itgb1P09055 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Itgb1P09055 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Itgb1P09055 Gm14859-201ENSMUST00000117752 357 ntBASIC18.55■□□□□ 0.56
Itgb1P09055 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Itgb1P09055 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC18.55■□□□□ 0.56
Itgb1P09055 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.55■□□□□ 0.56
Itgb1P09055 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Itgb1P09055 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Itgb1P09055 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Itgb1P09055 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
Itgb1P09055 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Itgb1P09055 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Itgb1P09055 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Itgb1P09055 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Itgb1P09055 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Itgb1P09055 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Itgb1P09055 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Itgb1P09055 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Itgb1P09055 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Itgb1P09055 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Itgb1P09055 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Itgb1P09055 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Itgb1P09055 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Itgb1P09055 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Itgb1P09055 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Itgb1P09055 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.54■□□□□ 0.56
Itgb1P09055 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Itgb1P09055 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms