Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Sod1P08228 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sod1P08228 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Sod1P08228 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sod1P08228 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sod1P08228 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC16.75■□□□□ 0.27
Sod1P08228 Gm25016-201ENSMUST00000158399 131 ntBASIC16.75■□□□□ 0.27
Sod1P08228 Gm37025-201ENSMUST00000195159 829 ntBASIC16.75■□□□□ 0.27
Sod1P08228 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sod1P08228 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sod1P08228 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sod1P08228 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Sod1P08228 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Sod1P08228 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sod1P08228 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sod1P08228 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sod1P08228 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Sod1P08228 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Sod1P08228 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sod1P08228 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Sod1P08228 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sod1P08228 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sod1P08228 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sod1P08228 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sod1P08228 Gm8258-201ENSMUST00000055593 1449 ntBASIC16.74■□□□□ 0.27
Sod1P08228 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.74■□□□□ 0.27
Sod1P08228 Mir1668-201ENSMUST00000184114 107 ntBASIC16.74■□□□□ 0.27
Sod1P08228 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC16.74■□□□□ 0.27
Sod1P08228 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.74■□□□□ 0.27
Sod1P08228 Gm21559-201ENSMUST00000220638 855 ntBASIC16.74■□□□□ 0.27
Sod1P08228 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sod1P08228 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sod1P08228 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sod1P08228 Gm8587-201ENSMUST00000076538 843 ntBASIC16.74■□□□□ 0.27
Sod1P08228 Notumos-201ENSMUST00000151998 2659 ntBASIC16.74■□□□□ 0.27
Sod1P08228 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sod1P08228 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Sod1P08228 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Sod1P08228 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Sod1P08228 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sod1P08228 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sod1P08228 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sod1P08228 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sod1P08228 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sod1P08228 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Sod1P08228 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sod1P08228 Ank2-226ENSMUST00000189368 339 ntBASIC16.73■□□□□ 0.27
Sod1P08228 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sod1P08228 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sod1P08228 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sod1P08228 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC16.73■□□□□ 0.27
Sod1P08228 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
Sod1P08228 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sod1P08228 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sod1P08228 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sod1P08228 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.72■□□□□ 0.27
Sod1P08228 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sod1P08228 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sod1P08228 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sod1P08228 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sod1P08228 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sod1P08228 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.72■□□□□ 0.27
Sod1P08228 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Sod1P08228 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Sod1P08228 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Sod1P08228 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sod1P08228 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Sod1P08228 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sod1P08228 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sod1P08228 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Sod1P08228 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sod1P08228 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sod1P08228 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sod1P08228 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Sod1P08228 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sod1P08228 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sod1P08228 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sod1P08228 Gm43231-201ENSMUST00000202960 2258 ntBASIC16.71■□□□□ 0.27
Sod1P08228 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sod1P08228 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sod1P08228 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sod1P08228 Gm17661-201ENSMUST00000170317 270 ntBASIC16.71■□□□□ 0.27
Sod1P08228 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC16.71■□□□□ 0.27
Sod1P08228 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC16.71■□□□□ 0.27
Sod1P08228 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.71■□□□□ 0.27
Sod1P08228 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sod1P08228 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sod1P08228 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.71■□□□□ 0.27
Sod1P08228 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sod1P08228 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Sod1P08228 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
Sod1P08228 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
Sod1P08228 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sod1P08228 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sod1P08228 Gm14859-201ENSMUST00000117752 357 ntBASIC16.7■□□□□ 0.26
Sod1P08228 Gm27389-201ENSMUST00000183622 195 ntBASIC16.7■□□□□ 0.26
Sod1P08228 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Sod1P08228 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sod1P08228 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Sod1P08228 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms