Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
TnfP06804 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TnfP06804 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.87■□□□□ 0.61
TnfP06804 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.87■□□□□ 0.61
TnfP06804 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.87■□□□□ 0.61
TnfP06804 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TnfP06804 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TnfP06804 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
TnfP06804 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.87■□□□□ 0.61
TnfP06804 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TnfP06804 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TnfP06804 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TnfP06804 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TnfP06804 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
TnfP06804 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TnfP06804 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TnfP06804 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.86■□□□□ 0.61
TnfP06804 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.86■□□□□ 0.61
TnfP06804 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.86■□□□□ 0.61
TnfP06804 Gm29791-202ENSMUST00000207888 369 ntBASIC18.86■□□□□ 0.61
TnfP06804 Gm4974-201ENSMUST00000209974 875 ntBASIC18.86■□□□□ 0.61
TnfP06804 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TnfP06804 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TnfP06804 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.86■□□□□ 0.61
TnfP06804 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
TnfP06804 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TnfP06804 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TnfP06804 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TnfP06804 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TnfP06804 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TnfP06804 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
TnfP06804 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TnfP06804 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TnfP06804 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
TnfP06804 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TnfP06804 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TnfP06804 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TnfP06804 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TnfP06804 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
TnfP06804 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TnfP06804 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TnfP06804 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TnfP06804 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
TnfP06804 Gm13401-201ENSMUST00000117074 291 ntBASIC18.85■□□□□ 0.61
TnfP06804 Gm6433-201ENSMUST00000118634 875 ntBASIC18.85■□□□□ 0.61
TnfP06804 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TnfP06804 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
TnfP06804 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TnfP06804 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TnfP06804 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TnfP06804 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
TnfP06804 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TnfP06804 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TnfP06804 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TnfP06804 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TnfP06804 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TnfP06804 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.84■□□□□ 0.61
TnfP06804 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TnfP06804 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TnfP06804 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TnfP06804 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TnfP06804 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TnfP06804 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC18.84■□□□□ 0.61
TnfP06804 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TnfP06804 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC18.84■□□□□ 0.61
TnfP06804 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TnfP06804 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
TnfP06804 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TnfP06804 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TnfP06804 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TnfP06804 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TnfP06804 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.84■□□□□ 0.61
TnfP06804 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
TnfP06804 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TnfP06804 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
TnfP06804 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
TnfP06804 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
TnfP06804 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
TnfP06804 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TnfP06804 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TnfP06804 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TnfP06804 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TnfP06804 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TnfP06804 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
TnfP06804 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
TnfP06804 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TnfP06804 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.83■□□□□ 0.6
TnfP06804 Gm11539-201ENSMUST00000119837 557 ntBASIC18.83■□□□□ 0.6
TnfP06804 Gm13436-201ENSMUST00000120418 567 ntBASIC18.83■□□□□ 0.6
TnfP06804 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
TnfP06804 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
TnfP06804 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TnfP06804 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TnfP06804 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TnfP06804 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TnfP06804 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
TnfP06804 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.83■□□□□ 0.6
TnfP06804 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TnfP06804 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TnfP06804 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms