Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PdgfrbP05622 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PdgfrbP05622 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.94■□□□□ 0.46
PdgfrbP05622 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PdgfrbP05622 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PdgfrbP05622 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PdgfrbP05622 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.94■□□□□ 0.46
PdgfrbP05622 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PdgfrbP05622 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PdgfrbP05622 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PdgfrbP05622 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PdgfrbP05622 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PdgfrbP05622 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.93■□□□□ 0.46
PdgfrbP05622 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PdgfrbP05622 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PdgfrbP05622 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
PdgfrbP05622 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PdgfrbP05622 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PdgfrbP05622 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PdgfrbP05622 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
PdgfrbP05622 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.93■□□□□ 0.46
PdgfrbP05622 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PdgfrbP05622 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
PdgfrbP05622 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PdgfrbP05622 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
PdgfrbP05622 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PdgfrbP05622 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.92■□□□□ 0.46
PdgfrbP05622 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
PdgfrbP05622 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PdgfrbP05622 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PdgfrbP05622 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PdgfrbP05622 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PdgfrbP05622 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PdgfrbP05622 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PdgfrbP05622 Gm12527-201ENSMUST00000117967 564 ntBASIC17.92■□□□□ 0.46
PdgfrbP05622 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.92■□□□□ 0.46
PdgfrbP05622 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PdgfrbP05622 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PdgfrbP05622 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PdgfrbP05622 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.92■□□□□ 0.46
PdgfrbP05622 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PdgfrbP05622 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
PdgfrbP05622 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PdgfrbP05622 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PdgfrbP05622 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
PdgfrbP05622 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.92■□□□□ 0.46
PdgfrbP05622 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PdgfrbP05622 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PdgfrbP05622 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PdgfrbP05622 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PdgfrbP05622 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.91■□□□□ 0.46
PdgfrbP05622 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PdgfrbP05622 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.91■□□□□ 0.46
PdgfrbP05622 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PdgfrbP05622 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PdgfrbP05622 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PdgfrbP05622 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.91■□□□□ 0.46
PdgfrbP05622 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.91■□□□□ 0.46
PdgfrbP05622 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PdgfrbP05622 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PdgfrbP05622 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PdgfrbP05622 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.91■□□□□ 0.46
PdgfrbP05622 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PdgfrbP05622 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PdgfrbP05622 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PdgfrbP05622 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PdgfrbP05622 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
PdgfrbP05622 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PdgfrbP05622 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PdgfrbP05622 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PdgfrbP05622 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PdgfrbP05622 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PdgfrbP05622 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.9■□□□□ 0.46
PdgfrbP05622 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PdgfrbP05622 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.9■□□□□ 0.46
PdgfrbP05622 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.9■□□□□ 0.46
PdgfrbP05622 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.9■□□□□ 0.46
PdgfrbP05622 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PdgfrbP05622 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PdgfrbP05622 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PdgfrbP05622 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.9■□□□□ 0.46
PdgfrbP05622 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.9■□□□□ 0.46
PdgfrbP05622 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PdgfrbP05622 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PdgfrbP05622 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PdgfrbP05622 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PdgfrbP05622 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.89■□□□□ 0.45
PdgfrbP05622 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.89■□□□□ 0.45
PdgfrbP05622 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PdgfrbP05622 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC17.89■□□□□ 0.45
PdgfrbP05622 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
PdgfrbP05622 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PdgfrbP05622 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
PdgfrbP05622 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PdgfrbP05622 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PdgfrbP05622 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PdgfrbP05622 Mir2861-201ENSMUST00000175539 82 ntBASIC17.88■□□□□ 0.45
PdgfrbP05622 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.88■□□□□ 0.45
PdgfrbP05622 Gm37856-201ENSMUST00000191634 999 ntBASIC17.88■□□□□ 0.45
PdgfrbP05622 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms