Protein–RNA interactions for Protein: O88974

Setdb1, Histone-lysine N-methyltransferase SETDB1, mousemouse

Predictions only

Length 1,307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Setdb1O88974 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Setdb1O88974 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Setdb1O88974 AC134329.2-201ENSMUST00000217897 428 ntBASIC21.71■■□□□ 1.07
Setdb1O88974 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Setdb1O88974 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Setdb1O88974 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC21.7■■□□□ 1.06
Setdb1O88974 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Setdb1O88974 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Setdb1O88974 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Setdb1O88974 Mir5130-201ENSMUST00000175160 84 ntBASIC21.7■■□□□ 1.06
Setdb1O88974 AC166341.7-201ENSMUST00000221698 126 ntBASIC21.7■■□□□ 1.06
Setdb1O88974 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Setdb1O88974 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Setdb1O88974 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Setdb1O88974 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Setdb1O88974 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Setdb1O88974 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Setdb1O88974 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC21.69■■□□□ 1.06
Setdb1O88974 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Setdb1O88974 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Setdb1O88974 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Setdb1O88974 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Setdb1O88974 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Setdb1O88974 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC21.69■■□□□ 1.06
Setdb1O88974 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Setdb1O88974 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Setdb1O88974 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Setdb1O88974 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Setdb1O88974 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC21.69■■□□□ 1.06
Setdb1O88974 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Setdb1O88974 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Setdb1O88974 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Setdb1O88974 Gm6627-201ENSMUST00000218299 2386 ntBASIC21.68■■□□□ 1.06
Setdb1O88974 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Setdb1O88974 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
Setdb1O88974 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC21.68■■□□□ 1.06
Setdb1O88974 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC21.68■■□□□ 1.06
Setdb1O88974 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Setdb1O88974 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Setdb1O88974 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Setdb1O88974 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Setdb1O88974 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Setdb1O88974 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Setdb1O88974 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Setdb1O88974 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Setdb1O88974 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Setdb1O88974 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Setdb1O88974 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Setdb1O88974 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Setdb1O88974 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Setdb1O88974 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Setdb1O88974 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Setdb1O88974 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC21.67■■□□□ 1.06
Setdb1O88974 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Setdb1O88974 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Setdb1O88974 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Setdb1O88974 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Setdb1O88974 Tgds-204ENSMUST00000228543 1594 ntBASIC21.66■■□□□ 1.06
Setdb1O88974 Gm10654-201ENSMUST00000098653 1633 ntBASIC21.66■■□□□ 1.06
Setdb1O88974 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Setdb1O88974 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Setdb1O88974 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Setdb1O88974 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Setdb1O88974 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC21.66■■□□□ 1.06
Setdb1O88974 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Setdb1O88974 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC21.65■■□□□ 1.06
Setdb1O88974 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Setdb1O88974 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Setdb1O88974 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Setdb1O88974 Gm27463-201ENSMUST00000183569 57 ntBASIC21.65■■□□□ 1.06
Setdb1O88974 Gm43353-201ENSMUST00000199224 1295 ntBASIC21.65■■□□□ 1.06
Setdb1O88974 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Setdb1O88974 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Setdb1O88974 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Setdb1O88974 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Setdb1O88974 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Setdb1O88974 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Setdb1O88974 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC21.64■■□□□ 1.06
Setdb1O88974 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Setdb1O88974 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Setdb1O88974 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC21.64■■□□□ 1.05
Setdb1O88974 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC21.64■■□□□ 1.05
Setdb1O88974 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC21.64■■□□□ 1.05
Setdb1O88974 Gm22697-201ENSMUST00000175194 63 ntBASIC21.64■■□□□ 1.05
Setdb1O88974 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
Setdb1O88974 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Setdb1O88974 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Setdb1O88974 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Setdb1O88974 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Setdb1O88974 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Setdb1O88974 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Setdb1O88974 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Setdb1O88974 Gm38342-201ENSMUST00000195710 2980 ntBASIC21.63■■□□□ 1.05
Setdb1O88974 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Setdb1O88974 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Setdb1O88974 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Setdb1O88974 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Setdb1O88974 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Setdb1O88974 Gm25016-201ENSMUST00000158399 131 ntBASIC21.62■■□□□ 1.05
Setdb1O88974 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC21.62■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms