Protein–RNA interactions for Protein: O88632

Sema3f, Semaphorin-3F, mousemouse

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sema3fO88632 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Sema3fO88632 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sema3fO88632 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Sema3fO88632 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Sema3fO88632 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Sema3fO88632 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sema3fO88632 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Sema3fO88632 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC20.51■□□□□ 0.87
Sema3fO88632 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sema3fO88632 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Sema3fO88632 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Sema3fO88632 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sema3fO88632 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sema3fO88632 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC20.5■□□□□ 0.87
Sema3fO88632 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sema3fO88632 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Sema3fO88632 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC20.5■□□□□ 0.87
Sema3fO88632 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sema3fO88632 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sema3fO88632 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC20.5■□□□□ 0.87
Sema3fO88632 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sema3fO88632 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sema3fO88632 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sema3fO88632 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sema3fO88632 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sema3fO88632 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Sema3fO88632 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC20.49■□□□□ 0.87
Sema3fO88632 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Sema3fO88632 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sema3fO88632 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sema3fO88632 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sema3fO88632 Fst-202ENSMUST00000223640 2612 ntBASIC20.49■□□□□ 0.87
Sema3fO88632 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sema3fO88632 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sema3fO88632 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sema3fO88632 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC20.48■□□□□ 0.87
Sema3fO88632 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Sema3fO88632 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sema3fO88632 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sema3fO88632 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sema3fO88632 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Sema3fO88632 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Sema3fO88632 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Sema3fO88632 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sema3fO88632 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sema3fO88632 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sema3fO88632 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sema3fO88632 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sema3fO88632 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sema3fO88632 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
Sema3fO88632 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Sema3fO88632 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Sema3fO88632 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Sema3fO88632 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC20.47■□□□□ 0.87
Sema3fO88632 Gm38027-201ENSMUST00000192315 235 ntBASIC20.47■□□□□ 0.87
Sema3fO88632 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sema3fO88632 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Sema3fO88632 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sema3fO88632 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sema3fO88632 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sema3fO88632 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Sema3fO88632 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sema3fO88632 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sema3fO88632 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sema3fO88632 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sema3fO88632 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sema3fO88632 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sema3fO88632 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC20.46■□□□□ 0.87
Sema3fO88632 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Sema3fO88632 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Sema3fO88632 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC20.46■□□□□ 0.87
Sema3fO88632 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Sema3fO88632 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Sema3fO88632 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sema3fO88632 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Sema3fO88632 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC20.45■□□□□ 0.86
Sema3fO88632 Gm35558-201ENSMUST00000222675 2219 ntBASIC20.45■□□□□ 0.86
Sema3fO88632 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Sema3fO88632 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Sema3fO88632 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Sema3fO88632 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Sema3fO88632 Gm4974-201ENSMUST00000209974 875 ntBASIC20.45■□□□□ 0.86
Sema3fO88632 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC20.45■□□□□ 0.86
Sema3fO88632 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sema3fO88632 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sema3fO88632 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sema3fO88632 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sema3fO88632 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sema3fO88632 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sema3fO88632 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sema3fO88632 Dmtn-210ENSMUST00000228824 2377 ntBASIC20.44■□□□□ 0.86
Sema3fO88632 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sema3fO88632 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC20.44■□□□□ 0.86
Sema3fO88632 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sema3fO88632 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sema3fO88632 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
Sema3fO88632 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC20.44■□□□□ 0.86
Sema3fO88632 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC20.44■□□□□ 0.86
Sema3fO88632 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sema3fO88632 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms