Protein–RNA interactions for Protein: O88575

Slc6a20b, Sodium- and chloride-dependent transporter XTRP3B, mousemouse

Predictions only

Length 635 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20bO88575 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.42■□□□□ 0.7
Slc6a20bO88575 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Slc6a20bO88575 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc6a20bO88575 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc6a20bO88575 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Slc6a20bO88575 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc6a20bO88575 Gm24589-201ENSMUST00000116692 94 ntBASIC19.41■□□□□ 0.7
Slc6a20bO88575 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc6a20bO88575 Gm18115-201ENSMUST00000221209 621 ntBASIC19.41■□□□□ 0.7
Slc6a20bO88575 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc6a20bO88575 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc6a20bO88575 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc6a20bO88575 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Slc6a20bO88575 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc6a20bO88575 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc6a20bO88575 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Slc6a20bO88575 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc6a20bO88575 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.4■□□□□ 0.7
Slc6a20bO88575 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc6a20bO88575 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc6a20bO88575 Gm11950-201ENSMUST00000121615 838 ntBASIC19.4■□□□□ 0.7
Slc6a20bO88575 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Slc6a20bO88575 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC19.4■□□□□ 0.7
Slc6a20bO88575 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Slc6a20bO88575 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc6a20bO88575 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Slc6a20bO88575 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc6a20bO88575 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.4■□□□□ 0.7
Slc6a20bO88575 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc6a20bO88575 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.4■□□□□ 0.7
Slc6a20bO88575 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Slc6a20bO88575 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc6a20bO88575 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Slc6a20bO88575 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Slc6a20bO88575 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC19.39■□□□□ 0.7
Slc6a20bO88575 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.7
Slc6a20bO88575 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC19.39■□□□□ 0.69
Slc6a20bO88575 Gm25925-201ENSMUST00000158314 306 ntBASIC19.39■□□□□ 0.69
Slc6a20bO88575 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC19.39■□□□□ 0.69
Slc6a20bO88575 Gm27357-201ENSMUST00000183754 135 ntBASIC19.39■□□□□ 0.69
Slc6a20bO88575 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Slc6a20bO88575 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slc6a20bO88575 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slc6a20bO88575 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Slc6a20bO88575 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slc6a20bO88575 Gm37820-201ENSMUST00000194021 2147 ntBASIC19.39■□□□□ 0.69
Slc6a20bO88575 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Slc6a20bO88575 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Slc6a20bO88575 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Slc6a20bO88575 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Slc6a20bO88575 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Slc6a20bO88575 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Slc6a20bO88575 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Slc6a20bO88575 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Slc6a20bO88575 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Slc6a20bO88575 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Slc6a20bO88575 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Slc6a20bO88575 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Slc6a20bO88575 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Slc6a20bO88575 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Slc6a20bO88575 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Slc6a20bO88575 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
Slc6a20bO88575 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slc6a20bO88575 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Slc6a20bO88575 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC19.37■□□□□ 0.69
Slc6a20bO88575 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slc6a20bO88575 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC19.37■□□□□ 0.69
Slc6a20bO88575 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Slc6a20bO88575 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slc6a20bO88575 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slc6a20bO88575 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slc6a20bO88575 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Slc6a20bO88575 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slc6a20bO88575 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Slc6a20bO88575 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Slc6a20bO88575 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc6a20bO88575 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc6a20bO88575 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc6a20bO88575 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.36■□□□□ 0.69
Slc6a20bO88575 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc6a20bO88575 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Slc6a20bO88575 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Slc6a20bO88575 Gm27742-201ENSMUST00000184667 60 ntBASIC19.36■□□□□ 0.69
Slc6a20bO88575 Gm43514-201ENSMUST00000198852 424 ntBASIC19.36■□□□□ 0.69
Slc6a20bO88575 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc6a20bO88575 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc6a20bO88575 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Slc6a20bO88575 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Slc6a20bO88575 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc6a20bO88575 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Slc6a20bO88575 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc6a20bO88575 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Slc6a20bO88575 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc6a20bO88575 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc6a20bO88575 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Slc6a20bO88575 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC19.35■□□□□ 0.69
Slc6a20bO88575 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.35■□□□□ 0.69
Slc6a20bO88575 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.35■□□□□ 0.69
Slc6a20bO88575 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
Slc6a20bO88575 Iqck-206ENSMUST00000208658 2891 ntBASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms