Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cacna1hO88427 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cacna1hO88427 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Cacna1hO88427 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cacna1hO88427 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC17.32■□□□□ 0.36
Cacna1hO88427 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC17.32■□□□□ 0.36
Cacna1hO88427 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cacna1hO88427 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cacna1hO88427 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Cacna1hO88427 Actl10-202ENSMUST00000226583 1501 ntBASIC17.32■□□□□ 0.36
Cacna1hO88427 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.32■□□□□ 0.36
Cacna1hO88427 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Cacna1hO88427 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cacna1hO88427 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Cacna1hO88427 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cacna1hO88427 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC17.32■□□□□ 0.36
Cacna1hO88427 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cacna1hO88427 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Cacna1hO88427 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.32■□□□□ 0.36
Cacna1hO88427 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cacna1hO88427 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cacna1hO88427 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cacna1hO88427 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cacna1hO88427 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cacna1hO88427 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Cacna1hO88427 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC17.31■□□□□ 0.36
Cacna1hO88427 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cacna1hO88427 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cacna1hO88427 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cacna1hO88427 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cacna1hO88427 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cacna1hO88427 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.31■□□□□ 0.36
Cacna1hO88427 AC131586.3-201ENSMUST00000228355 1367 ntBASIC17.31■□□□□ 0.36
Cacna1hO88427 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Cacna1hO88427 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Cacna1hO88427 Gm15467-201ENSMUST00000120582 445 ntBASIC17.31■□□□□ 0.36
Cacna1hO88427 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cacna1hO88427 Gm10052-201ENSMUST00000168019 960 ntBASIC17.31■□□□□ 0.36
Cacna1hO88427 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Cacna1hO88427 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.31■□□□□ 0.36
Cacna1hO88427 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cacna1hO88427 Il3ra-202ENSMUST00000223589 738 ntBASIC17.31■□□□□ 0.36
Cacna1hO88427 Gm7729-201ENSMUST00000050143 801 ntBASIC17.31■□□□□ 0.36
Cacna1hO88427 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Cacna1hO88427 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cacna1hO88427 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cacna1hO88427 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC17.31■□□□□ 0.36
Cacna1hO88427 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Cacna1hO88427 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cacna1hO88427 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.3■□□□□ 0.36
Cacna1hO88427 Gm13401-201ENSMUST00000117074 291 ntBASIC17.3■□□□□ 0.36
Cacna1hO88427 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cacna1hO88427 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cacna1hO88427 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cacna1hO88427 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.3■□□□□ 0.36
Cacna1hO88427 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cacna1hO88427 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cacna1hO88427 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cacna1hO88427 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Cacna1hO88427 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC17.3■□□□□ 0.36
Cacna1hO88427 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cacna1hO88427 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cacna1hO88427 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cacna1hO88427 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC17.29■□□□□ 0.36
Cacna1hO88427 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cacna1hO88427 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cacna1hO88427 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cacna1hO88427 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC17.29■□□□□ 0.36
Cacna1hO88427 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.29■□□□□ 0.36
Cacna1hO88427 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cacna1hO88427 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cacna1hO88427 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.29■□□□□ 0.36
Cacna1hO88427 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cacna1hO88427 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cacna1hO88427 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cacna1hO88427 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cacna1hO88427 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Cacna1hO88427 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cacna1hO88427 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cacna1hO88427 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.28■□□□□ 0.36
Cacna1hO88427 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Cacna1hO88427 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cacna1hO88427 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC17.28■□□□□ 0.36
Cacna1hO88427 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC17.28■□□□□ 0.36
Cacna1hO88427 Gm12350-201ENSMUST00000121208 462 ntBASIC17.28■□□□□ 0.36
Cacna1hO88427 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC17.28■□□□□ 0.36
Cacna1hO88427 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cacna1hO88427 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.28■□□□□ 0.36
Cacna1hO88427 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.27■□□□□ 0.36
Cacna1hO88427 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cacna1hO88427 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Cacna1hO88427 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cacna1hO88427 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cacna1hO88427 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cacna1hO88427 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cacna1hO88427 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.27■□□□□ 0.36
Cacna1hO88427 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Cacna1hO88427 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cacna1hO88427 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Cacna1hO88427 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms