Protein–RNA interactions for Protein: O88245

Gm10139, Mszf85 (Fragment), mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10139O88245 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm10139O88245 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Gm10139O88245 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm10139O88245 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm10139O88245 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm10139O88245 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Gm10139O88245 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm10139O88245 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm10139O88245 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Gm10139O88245 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm10139O88245 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm10139O88245 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm10139O88245 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm10139O88245 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Gm10139O88245 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Gm10139O88245 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm10139O88245 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm10139O88245 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Gm10139O88245 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Gm10139O88245 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Gm10139O88245 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm10139O88245 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm10139O88245 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm10139O88245 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm10139O88245 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm10139O88245 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm10139O88245 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm10139O88245 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.68
Gm10139O88245 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Gm10139O88245 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC10.83□□□□□ -0.68
Gm10139O88245 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm10139O88245 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm10139O88245 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Gm10139O88245 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm10139O88245 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm10139O88245 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm10139O88245 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm10139O88245 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm10139O88245 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm10139O88245 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Gm10139O88245 Gm37519-201ENSMUST00000191687 2210 ntBASIC10.82□□□□□ -0.68
Gm10139O88245 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm10139O88245 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC10.82□□□□□ -0.68
Gm10139O88245 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm10139O88245 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC10.82□□□□□ -0.68
Gm10139O88245 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm10139O88245 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Gm10139O88245 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm10139O88245 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm10139O88245 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Gm10139O88245 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Gm10139O88245 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC10.82□□□□□ -0.68
Gm10139O88245 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC10.82□□□□□ -0.68
Gm10139O88245 Gm29791-202ENSMUST00000207888 369 ntBASIC10.82□□□□□ -0.68
Gm10139O88245 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm10139O88245 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm10139O88245 Gm6365-201ENSMUST00000054711 744 ntBASIC10.82□□□□□ -0.68
Gm10139O88245 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm10139O88245 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm10139O88245 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Gm10139O88245 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm10139O88245 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Gm10139O88245 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm10139O88245 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm10139O88245 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm10139O88245 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm10139O88245 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm10139O88245 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm10139O88245 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm10139O88245 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Gm10139O88245 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm10139O88245 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm10139O88245 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC10.81□□□□□ -0.68
Gm10139O88245 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm10139O88245 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm10139O88245 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Gm10139O88245 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC10.81□□□□□ -0.68
Gm10139O88245 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm10139O88245 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm10139O88245 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm10139O88245 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm10139O88245 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Gm10139O88245 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm10139O88245 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm10139O88245 Gm2399-201ENSMUST00000104944 225 ntBASIC10.81□□□□□ -0.68
Gm10139O88245 Gm7290-201ENSMUST00000104990 617 ntBASIC10.81□□□□□ -0.68
Gm10139O88245 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC10.81□□□□□ -0.68
Gm10139O88245 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Gm10139O88245 Gm12918-201ENSMUST00000120234 636 ntBASIC10.81□□□□□ -0.68
Gm10139O88245 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC10.81□□□□□ -0.68
Gm10139O88245 Gm15710-201ENSMUST00000121821 636 ntBASIC10.81□□□□□ -0.68
Gm10139O88245 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC10.81□□□□□ -0.68
Gm10139O88245 Gm5075-201ENSMUST00000196916 622 ntBASIC10.81□□□□□ -0.68
Gm10139O88245 Gm7291-201ENSMUST00000199147 382 ntBASIC10.81□□□□□ -0.68
Gm10139O88245 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC10.81□□□□□ -0.68
Gm10139O88245 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC10.81□□□□□ -0.68
Gm10139O88245 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC10.81□□□□□ -0.68
Gm10139O88245 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm10139O88245 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm10139O88245 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms